RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 INVSQ9Y283 1065 aa6.76□□□□□ -1.33
LRCH3-211ENST00000466054 TSC22D4Q9Y3Q8 395 aa6.76□□□□□ -1.33
LRCH3-211ENST00000466054 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
LRCH3-211ENST00000466054 NOP2P46087 812 aaKnown RBP6.75□□□□□ -1.33
LRCH3-211ENST00000466054 EIF6P56537 245 aaKnown RBP6.75□□□□□ -1.33
LRCH3-211ENST00000466054 NOL9Q5SY16 702 aaKnown RBP6.75□□□□□ -1.33
LRCH3-211ENST00000466054 Q8N1X5 172 aa6.75□□□□□ -1.33
LRCH3-211ENST00000466054 CPLX3Q8WVH0 158 aa6.75□□□□□ -1.33
LRCH3-211ENST00000466054 ARMC5Q96C12 935 aa6.75□□□□□ -1.33
LRCH3-211ENST00000466054 ATG4CQ96DT6 458 aa6.75□□□□□ -1.33
LRCH3-211ENST00000466054 CRBNQ96SW2 442 aa6.75□□□□□ -1.33
LRCH3-211ENST00000466054 TANGO6Q9C0B7 1094 aa6.75□□□□□ -1.33
LRCH3-211ENST00000466054 RXFP1Q9HBX9 757 aa6.75□□□□□ -1.33
LRCH3-211ENST00000466054 PPT2Q9UMR5 302 aa6.75□□□□□ -1.33
LRCH3-211ENST00000466054 L1CAMP32004 1257 aa6.74□□□□□ -1.33
LRCH3-211ENST00000466054 GIPRP48546 466 aa6.74□□□□□ -1.33
LRCH3-211ENST00000466054 LIMS2Q7Z4I7 341 aa6.74□□□□□ -1.33
LRCH3-211ENST00000466054 MCF2L2Q86YR7 1114 aa6.74□□□□□ -1.33
LRCH3-211ENST00000466054 TAB3Q8N5C8 712 aaPredicted RBP6.74□□□□□ -1.33
LRCH3-211ENST00000466054 PEX11GQ96HA9 241 aa6.74□□□□□ -1.33
LRCH3-211ENST00000466054 SPATA6Q9NWH7 488 aaPredicted RBP6.74□□□□□ -1.33
LRCH3-211ENST00000466054 ATP2B1P20020 1258 aa6.73□□□□□ -1.33
LRCH3-211ENST00000466054 CACNB2Q08289 660 aaPredicted RBP6.73□□□□□ -1.33
LRCH3-211ENST00000466054 FBXW10Q5XX13 1052 aa6.73□□□□□ -1.33
LRCH3-211ENST00000466054 INTS3Q68E01 1043 aaKnown RBP6.73□□□□□ -1.33
LRCH3-211ENST00000466054 TMEM192Q8IY95 271 aa6.73□□□□□ -1.33
LRCH3-211ENST00000466054 CCDC144CPQ8IYA2 1237 aa6.73□□□□□ -1.33
LRCH3-211ENST00000466054 TSPAN17Q96FV3 270 aa6.73□□□□□ -1.33
LRCH3-211ENST00000466054 SHDQ96IW2 340 aa6.73□□□□□ -1.33
LRCH3-211ENST00000466054 TM9SF2Q99805 663 aa6.73□□□□□ -1.33
LRCH3-211ENST00000466054 MROH6A6NGR9 719 aa6.72□□□□□ -1.33
LRCH3-211ENST00000466054 FGF10O15520 208 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-211ENST00000466054 AMHP03971 560 aa6.72□□□□□ -1.33
LRCH3-211ENST00000466054 CYP2C8P10632 490 aa6.72□□□□□ -1.33
LRCH3-211ENST00000466054 SLC9A5Q14940 896 aa6.72□□□□□ -1.33
LRCH3-211ENST00000466054 CCDC81Q6ZN84 652 aa6.72□□□□□ -1.33
LRCH3-211ENST00000466054 CPA5Q8WXQ8 436 aa6.72□□□□□ -1.33
LRCH3-211ENST00000466054 DDX11Q96FC9 970 aa6.72□□□□□ -1.33
LRCH3-211ENST00000466054 DHRS1Q96LJ7 313 aa6.72□□□□□ -1.33
LRCH3-211ENST00000466054 DRC1Q96MC2 740 aa6.72□□□□□ -1.33
LRCH3-211ENST00000466054 HS3ST3A1Q9Y663 406 aa6.72□□□□□ -1.33
LRCH3-211ENST00000466054 H0Y8X5 98 aa6.71□□□□□ -1.34
LRCH3-211ENST00000466054 TNFRSF10CO14798 259 aa6.71□□□□□ -1.34
LRCH3-211ENST00000466054 NME1P15531 152 aaKnown RBP6.71□□□□□ -1.34
LRCH3-211ENST00000466054 SURF1Q15526 300 aa6.71□□□□□ -1.34
LRCH3-211ENST00000466054 C7orf61Q8IZ16 206 aa6.71□□□□□ -1.34
LRCH3-211ENST00000466054 C19orf47Q8N9M1 422 aaKnown RBP6.71□□□□□ -1.34
LRCH3-211ENST00000466054 PTCHD1Q96NR3 888 aa6.71□□□□□ -1.34
LRCH3-211ENST00000466054 ZNF747Q9BV97 191 aa6.71□□□□□ -1.34
LRCH3-211ENST00000466054 KLC2Q9H0B6 622 aa6.71□□□□□ -1.34
LRCH3-211ENST00000466054 DEF6Q9H4E7 631 aa6.71□□□□□ -1.34
LRCH3-211ENST00000466054 GLI4P10075 376 aa6.7□□□□□ -1.34
LRCH3-211ENST00000466054 TNNI3KQ59H18 835 aa6.7□□□□□ -1.34
LRCH3-211ENST00000466054 FAM26FQ5R3K3 315 aa6.7□□□□□ -1.34
LRCH3-211ENST00000466054 LZTR1Q8N653 840 aa6.7□□□□□ -1.34
LRCH3-211ENST00000466054 PCED1AQ9H1Q7 454 aa6.7□□□□□ -1.34
LRCH3-211ENST00000466054 SLC12A7Q9Y666 1083 aa6.7□□□□□ -1.34
LRCH3-211ENST00000466054 FAM86C2PA6NEL3 165 aa6.69□□□□□ -1.34
LRCH3-211ENST00000466054 STK10O94804 968 aaKnown RBP6.69□□□□□ -1.34
LRCH3-211ENST00000466054 GUCY2CP25092 1073 aa6.69□□□□□ -1.34
LRCH3-211ENST00000466054 MCTP2Q6DN12 878 aa6.69□□□□□ -1.34
LRCH3-211ENST00000466054 PALM2Q8IXS6 379 aa6.69□□□□□ -1.34
LRCH3-211ENST00000466054 NLGN2Q8NFZ4 835 aa6.69□□□□□ -1.34
LRCH3-211ENST00000466054 ANAPC16Q96DE5 110 aa6.69□□□□□ -1.34
LRCH3-211ENST00000466054 ZNF408Q9H9D4 720 aa6.69□□□□□ -1.34
LRCH3-211ENST00000466054 PCDH18Q9HCL0 1135 aa6.69□□□□□ -1.34
LRCH3-211ENST00000466054 PRKAG3Q9UGI9 489 aa6.69□□□□□ -1.34
LRCH3-211ENST00000466054 NPEPPSL1A6NEC2 478 aa6.68□□□□□ -1.34
LRCH3-211ENST00000466054 LAMTOR5O43504 91 aa6.68□□□□□ -1.34
LRCH3-211ENST00000466054 ZBTB7AO95365 584 aa6.68□□□□□ -1.34
LRCH3-211ENST00000466054 CD3EP07766 207 aa6.68□□□□□ -1.34
LRCH3-211ENST00000466054 RPL13P26373 211 aaKnown RBP6.68□□□□□ -1.34
LRCH3-211ENST00000466054 CASP7P55210 303 aa6.68□□□□□ -1.34
LRCH3-211ENST00000466054 PLEKHH3Q7Z736 793 aa6.68□□□□□ -1.34
LRCH3-211ENST00000466054 NETO2Q8NC67 525 aa6.68□□□□□ -1.34
LRCH3-211ENST00000466054 USP33Q8TEY7 942 aa6.68□□□□□ -1.34
LRCH3-211ENST00000466054 UBXN4Q92575 508 aa6.68□□□□□ -1.34
LRCH3-211ENST00000466054 HIRIP3Q9BW71 556 aaPredicted RBP6.68□□□□□ -1.34
LRCH3-211ENST00000466054 SF3B6Q9Y3B4 125 aaKnown RBP6.68□□□□□ -1.34
LRCH3-211ENST00000466054 ETFBP38117 255 aa6.67□□□□□ -1.34
LRCH3-211ENST00000466054 ZNF585AQ6P3V2 769 aa6.67□□□□□ -1.34
LRCH3-211ENST00000466054 LINC00482Q8N8I6 264 aa6.67□□□□□ -1.34
LRCH3-211ENST00000466054 BRF1Q92994 677 aa6.67□□□□□ -1.34
LRCH3-211ENST00000466054 LCORQ96JN0 433 aaPredicted RBP6.67□□□□□ -1.34
LRCH3-211ENST00000466054 JADE2Q9NQC1 790 aa6.67□□□□□ -1.34
LRCH3-211ENST00000466054 SUCOQ9UBS9 1254 aaKnown RBP6.67□□□□□ -1.34
LRCH3-211ENST00000466054 RWDD3Q9Y3V2 267 aa6.67□□□□□ -1.34
LRCH3-211ENST00000466054 MRVI1Q9Y6F6 885 aa6.67□□□□□ -1.34
LRCH3-211ENST00000466054 GTF2F1P35269 517 aaKnown RBP eCLIP6.66□□□□□ -1.34
LRCH3-211ENST00000466054 THBS2P35442 1172 aa6.66□□□□□ -1.34
LRCH3-211ENST00000466054 POU4F1Q01851 419 aa6.66□□□□□ -1.34
LRCH3-211ENST00000466054 RBL2Q08999 1139 aa6.66□□□□□ -1.34
LRCH3-211ENST00000466054 KLF10Q13118 480 aa6.66□□□□□ -1.34
LRCH3-211ENST00000466054 ICAM4Q14773 271 aa6.66□□□□□ -1.34
LRCH3-211ENST00000466054 CDSNQ15517 529 aa6.66□□□□□ -1.34
LRCH3-211ENST00000466054 SOGA3Q5TF21 947 aa6.66□□□□□ -1.34
LRCH3-211ENST00000466054 NBPF6Q5VWK0 638 aa6.66□□□□□ -1.34
LRCH3-211ENST00000466054 CIR1Q86X95 450 aaPredicted RBP6.66□□□□□ -1.34
LRCH3-211ENST00000466054 CKAP2LQ8IYA6 745 aa6.66□□□□□ -1.34
LRCH3-211ENST00000466054 FIBCD1Q8N539 461 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms