RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 ACCSLQ4AC99 568 aa15.41■□□□□ 0.06
TGFBR3-204ENST00000465892 NAIF1Q69YI7 327 aaPredicted RBP15.41■□□□□ 0.06
TGFBR3-204ENST00000465892 ADGRA1Q86SQ6 560 aa15.41■□□□□ 0.06
TGFBR3-204ENST00000465892 DNAAF5Q86Y56 855 aa15.41■□□□□ 0.06
TGFBR3-204ENST00000465892 VGLL2Q8N8G2 317 aa15.41■□□□□ 0.06
TGFBR3-204ENST00000465892 GIMAP8Q8ND71 665 aaPredicted RBP15.41■□□□□ 0.06
TGFBR3-204ENST00000465892 ZSCAN10Q96SZ4 725 aaPredicted RBP15.41■□□□□ 0.06
TGFBR3-204ENST00000465892 SLIT3O75094 1523 aa15.41■□□□□ 0.06
TGFBR3-204ENST00000465892 ATXN2Q99700 1313 aaKnown RBP15.41■□□□□ 0.06
TGFBR3-204ENST00000465892 FAM170AA1A519 330 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 GMNCA6NCL1 334 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 RAD51CO43502 376 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 BCAMP50895 628 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 P2RX5Q93086 422 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 SLC39A2Q9NP94 309 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 BAIAP2L1Q9UHR4 511 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 LEMD3Q9Y2U8 911 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 ATRNO75882 1429 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 PKD1L3Q7Z443 1732 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 GCFC2P16383 781 aaKnown RBP15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 WLSQ5T9L3 541 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 ZBTB38Q8NAP3 1195 aaPredicted RBP15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 FAXDC2Q96IV6 333 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 SCN11AQ9UI33 1791 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 FAM205AQ6ZU69 1335 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 EZRP15311 586 aaKnown RBP15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 PRLRP16471 622 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 GBP2P32456 591 aaPredicted RBP15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 ASIC1P78348 528 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 ITIH3Q06033 890 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 ANKRD20A8PQ5CZ79 823 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 DTHD1Q6ZMT9 781 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 ZNF572Q7Z3I7 529 aaPredicted RBP15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 SEC16BQ96JE7 1060 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 NOX5Q96PH1 765 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 LRRC4CQ9HCJ2 640 aa15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 CNOT8Q9UFF9 292 aaKnown RBP15.4■□□□□ 0.06
TGFBR3-204ENST00000465892 GCOM1H8Y6P7 765 aaPredicted RBP15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 MYZAPP0CAP1 466 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 SCTRP47872 440 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 TROAPQ12815 778 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 FAM47AQ5JRC9 791 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 LRCH2Q5VUJ6 765 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 RETREG2Q8NC44 543 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 MDM1Q8TC05 714 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 ZNF622Q969S3 477 aaKnown RBP eCLIP15.39■□□□□ 0.054e-6■■□□□ 13.5
TGFBR3-204ENST00000465892 KANSL2Q9H9L4 492 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 TJP1Q07157 1748 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 USP54Q70EL1 1684 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 ARID4AP29374 1257 aaPredicted RBP15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 CTNNA1P35221 906 aaKnown RBP15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 HSD17B3P37058 310 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 CACNA2D4Q7Z3S7 1137 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 UBLCP1Q8WVY7 318 aaPredicted RBP15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 SGSM3Q96HU1 749 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 TANGO6Q9C0B7 1094 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 RNF41Q9H4P4 317 aaPredicted RBP15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 FBXO3Q9UK99 471 aa15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 NOVA2Q9UNW9 492 aaKnown RBP15.39■□□□□ 0.05
TGFBR3-204ENST00000465892 HMGB1P1B2RPK0 211 aaPredicted RBP15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 FLT3P36888 993 aa15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 THOC1Q96FV9 657 aaKnown RBP15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 NID2Q14112 1375 aa15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 IRS4O14654 1257 aaPredicted RBP15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 RHOBTB3O94955 611 aa15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 UQCRFS1P1P0C7P4 283 aa15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 CYP7A1P22680 504 aa15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 CPLX4Q7Z7G2 160 aa15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 AP1M1Q9BXS5 423 aa15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 TMBIM4Q9HC24 238 aa15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 KCNG1Q9UIX4 513 aa15.38■□□□□ 0.05
TGFBR3-204ENST00000465892 CCNE1P24864 410 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 LONP1P36776 959 aaKnown RBP15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 PPP1R7Q15435 360 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 INF2Q27J81 1249 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 HIBCHQ6NVY1 386 aaPredicted RBP15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 C4orf32Q8N8J7 132 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 NDST4Q9H3R1 872 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 RTL9Q8NET4 1388 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 LRP6O75581 1613 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 SCG2P13521 617 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 PLCG1P19174 1290 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 CTSWP56202 376 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 TMTC3Q6ZXV5 915 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 TEX11Q8IYF3 940 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 TCP11Q8WWU5 503 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 RAPGEF5Q92565 580 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 PAGR1Q9BTK6 254 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 PACSIN1Q9BY11 444 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 KLRC1P26715 233 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 ERVK-9P63128 1117 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 DYNLL1P63167 89 aaKnown RBP15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 UAP1Q16222 522 aaPredicted RBP15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 CDC37Q16543 378 aaPredicted RBP15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 PNMA8AQ86V59 439 aaPredicted RBP15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 ERGIC2Q96RQ1 377 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 NEUROG2Q9H2A3 272 aa15.37■□□□□ 0.05
TGFBR3-204ENST00000465892 SEMA6BQ9H3T3 888 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms