RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PRRT2Q7Z6L0 340 aaPredicted RBP8.59□□□□□ -1.03
SMC4-205ENST00000465563 COPS5Q92905 334 aa8.59□□□□□ -1.03
SMC4-205ENST00000465563 ANAPC16Q96DE5 110 aa8.59□□□□□ -1.03
SMC4-205ENST00000465563 ACBD3Q9H3P7 528 aa8.59□□□□□ -1.03
SMC4-205ENST00000465563 CLEC1BQ9P126 229 aa8.59□□□□□ -1.03
SMC4-205ENST00000465563 NOP56O00567 594 aaKnown RBP8.58□□□□□ -1.04
SMC4-205ENST00000465563 PLS3P13797 630 aa8.58□□□□□ -1.04
SMC4-205ENST00000465563 SCRN1Q12765 414 aa8.58□□□□□ -1.04
SMC4-205ENST00000465563 NCAPHQ15003 741 aa8.58□□□□□ -1.04
SMC4-205ENST00000465563 SMARCC2Q8TAQ2 1214 aa8.58□□□□□ -1.04
SMC4-205ENST00000465563 MMP19Q99542 508 aa8.58□□□□□ -1.04
SMC4-205ENST00000465563 SPATA25Q9BR10 227 aa8.58□□□□□ -1.04
SMC4-205ENST00000465563 USP40Q9NVE5 1235 aa8.58□□□□□ -1.04
SMC4-205ENST00000465563 KIAA1522Q9P206 1035 aaPredicted RBP8.58□□□□□ -1.04
SMC4-205ENST00000465563 NTRK1P04629 796 aa8.57□□□□□ -1.04
SMC4-205ENST00000465563 CACNB2Q08289 660 aaPredicted RBP8.57□□□□□ -1.04
SMC4-205ENST00000465563 NT5DC1Q5TFE4 455 aa8.57□□□□□ -1.04
SMC4-205ENST00000465563 CCSER2Q9H7U1 834 aa8.57□□□□□ -1.04
SMC4-205ENST00000465563 GPRC5CQ9NQ84 441 aa8.57□□□□□ -1.04
SMC4-205ENST00000465563 DLX2Q07687 328 aaPredicted RBP8.56□□□□□ -1.04
SMC4-205ENST00000465563 PPP1R14AQ96A00 147 aa8.56□□□□□ -1.04
SMC4-205ENST00000465563 PRICKLE3O43900 615 aaPredicted RBP8.55□□□□□ -1.04
SMC4-205ENST00000465563 PLP2Q04941 152 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 RTP5Q14D33 572 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 ZFYVE27Q5T4F4 411 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 MBLAC2Q68D91 279 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 GTF2IRD2BQ6EKJ0 949 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 GTF2IRD2Q86UP8 949 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 DCP2Q8IU60 420 aaKnown RBP8.55□□□□□ -1.04
SMC4-205ENST00000465563 TRIM59Q8IWR1 403 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 CARFQ8N187 725 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 PLEKHO2Q8TD55 490 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 BDH2Q9BUT1 245 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 CYP26B1Q9NR63 512 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 MARCH2Q9P0N8 246 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 SIT1Q9Y3P8 196 aa8.55□□□□□ -1.04
SMC4-205ENST00000465563 THBDP07204 575 aa8.54□□□□□ -1.04
SMC4-205ENST00000465563 UBXN11Q5T124 520 aa8.54□□□□□ -1.04
SMC4-205ENST00000465563 DBX2Q6ZNG2 339 aa8.54□□□□□ -1.04
SMC4-205ENST00000465563 DPF3Q92784 378 aa8.54□□□□□ -1.04
SMC4-205ENST00000465563 NOX5Q96PH1 765 aa8.54□□□□□ -1.04
SMC4-205ENST00000465563 UNCXA6NJT0 531 aa8.53□□□□□ -1.04
SMC4-205ENST00000465563 ATF4P18848 351 aaPredicted RBP8.53□□□□□ -1.04
SMC4-205ENST00000465563 TTLL7Q6ZT98 887 aa8.53□□□□□ -1.04
SMC4-205ENST00000465563 MRGPRX3Q96LB0 322 aa8.53□□□□□ -1.04
SMC4-205ENST00000465563 AP5M1Q9H0R1 490 aa8.53□□□□□ -1.04
SMC4-205ENST00000465563 NKX2-4Q9H2Z4 354 aa8.53□□□□□ -1.04
SMC4-205ENST00000465563 NTMQ9P121 344 aa8.53□□□□□ -1.04
SMC4-205ENST00000465563 CYP2C8P10632 490 aa8.52□□□□□ -1.05
SMC4-205ENST00000465563 SARSP49591 514 aaKnown RBP8.52□□□□□ -1.05
SMC4-205ENST00000465563 GJA9P57773 515 aa8.52□□□□□ -1.05
SMC4-205ENST00000465563 IQCEQ6IPM2 695 aa8.52□□□□□ -1.05
SMC4-205ENST00000465563 ZBTB8AQ96BR9 441 aa8.52□□□□□ -1.05
SMC4-205ENST00000465563 DDX11Q96FC9 970 aa8.52□□□□□ -1.05
SMC4-205ENST00000465563 KRTAP4-5Q9BYR2 181 aa8.52□□□□□ -1.05
SMC4-205ENST00000465563 SPATA6Q9NWH7 488 aaPredicted RBP8.52□□□□□ -1.05
SMC4-205ENST00000465563 BTG4Q9NY30 223 aa8.52□□□□□ -1.05
SMC4-205ENST00000465563 C22orf46C9J442 243 aa8.51□□□□□ -1.05
SMC4-205ENST00000465563 NOBOXO60393 691 aa8.51□□□□□ -1.05
SMC4-205ENST00000465563 INF2Q27J81 1249 aa8.51□□□□□ -1.05
SMC4-205ENST00000465563 ETV3LQ6ZN32 361 aa8.51□□□□□ -1.05
SMC4-205ENST00000465563 TEX2Q8IWB9 1127 aa8.51□□□□□ -1.05
SMC4-205ENST00000465563 LINC00482Q8N8I6 264 aa8.51□□□□□ -1.05
SMC4-205ENST00000465563 NPLOC4Q8TAT6 608 aa8.51□□□□□ -1.05
SMC4-205ENST00000465563 FRS2Q8WU20 508 aa8.51□□□□□ -1.05
SMC4-205ENST00000465563 LGR4Q9BXB1 951 aa8.51□□□□□ -1.05
SMC4-205ENST00000465563 PCDH18Q9HCL0 1135 aa8.51□□□□□ -1.05
SMC4-205ENST00000465563 SMAD7O15105 426 aaKnown RBP8.5□□□□□ -1.05
SMC4-205ENST00000465563 SMARCA5O60264 1052 aaPredicted RBP8.5□□□□□ -1.05
SMC4-205ENST00000465563 ADRB1P08588 477 aa8.5□□□□□ -1.05
SMC4-205ENST00000465563 SPATS1Q496A3 300 aa8.5□□□□□ -1.05
SMC4-205ENST00000465563 FERMT3Q86UX7 667 aa8.5□□□□□ -1.05
SMC4-205ENST00000465563 VPS37DQ86XT2 251 aa8.5□□□□□ -1.05
SMC4-205ENST00000465563 CAPN10Q9HC96 672 aa8.5□□□□□ -1.05
SMC4-205ENST00000465563 SGSM2O43147 1006 aa8.49□□□□□ -1.05
SMC4-205ENST00000465563 C8BP07358 591 aa8.49□□□□□ -1.05
SMC4-205ENST00000465563 NFKB2Q00653 900 aa8.49□□□□□ -1.05
SMC4-205ENST00000465563 EFEMP1Q12805 493 aa8.49□□□□□ -1.05
SMC4-205ENST00000465563 SMAD4Q13485 552 aaKnown RBP8.49□□□□□ -1.05
SMC4-205ENST00000465563 TNNI3KQ59H18 835 aa8.49□□□□□ -1.05
SMC4-205ENST00000465563 E4F1Q66K89 784 aaPredicted RBP8.49□□□□□ -1.05
SMC4-205ENST00000465563 C6orf15Q6UXA7 325 aaPredicted RBP8.49□□□□□ -1.05
SMC4-205ENST00000465563 HOMEZQ8IX15 550 aa8.49□□□□□ -1.05
SMC4-205ENST00000465563 DDX1Q92499 740 aaKnown RBP8.49□□□□□ -1.05
SMC4-205ENST00000465563 SEC14L1Q92503 715 aa8.49□□□□□ -1.05
SMC4-205ENST00000465563 GORASP1Q9BQQ3 440 aa8.49□□□□□ -1.05
SMC4-205ENST00000465563 ACTR10Q9NZ32 417 aa8.49□□□□□ -1.05
SMC4-205ENST00000465563 CNOT11Q9UKZ1 510 aaKnown RBP8.49□□□□□ -1.05
SMC4-205ENST00000465563 JAG2Q9Y219 1238 aa8.49□□□□□ -1.05
SMC4-205ENST00000465563 TIMM13Q9Y5L4 95 aaPredicted RBP8.49□□□□□ -1.05
SMC4-205ENST00000465563 MRVI1Q9Y6F6 885 aa8.49□□□□□ -1.05
SMC4-205ENST00000465563 HOXC12P31275 282 aa8.48□□□□□ -1.05
SMC4-205ENST00000465563 KRTAP10-2P60368 255 aa8.48□□□□□ -1.05
SMC4-205ENST00000465563 RPL11P62913 178 aaKnown RBP8.48□□□□□ -1.05
SMC4-205ENST00000465563 CYP4F3Q08477 520 aa8.48□□□□□ -1.05
SMC4-205ENST00000465563 SV2CQ496J9 727 aa8.48□□□□□ -1.05
SMC4-205ENST00000465563 ZNF761Q86XN6 746 aaPredicted RBP8.48□□□□□ -1.05
SMC4-205ENST00000465563 FAM178BQ8IXR5 827 aa8.48□□□□□ -1.05
SMC4-205ENST00000465563 BTN2A2Q8WVV5 523 aa8.48□□□□□ -1.05
SMC4-205ENST00000465563 LNPKQ9C0E8 428 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms