RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 MINDY4BA8MYZ0 360 aa11.59□□□□□ -0.55
USP39-212ENST00000465514 GJB5O95377 273 aa11.59□□□□□ -0.55
USP39-212ENST00000465514 RASA1P20936 1047 aa11.59□□□□□ -0.55
USP39-212ENST00000465514 PURAQ00577 322 aaKnown RBP11.59□□□□□ -0.55
USP39-212ENST00000465514 TIGD5Q53EQ6 642 aa11.59□□□□□ -0.55
USP39-212ENST00000465514 FBXO16Q8IX29 292 aaPredicted RBP11.59□□□□□ -0.55
USP39-212ENST00000465514 FAM133AQ8N9E0 248 aa11.59□□□□□ -0.55
USP39-212ENST00000465514 KBTBD3Q8NAB2 608 aa11.59□□□□□ -0.55
USP39-212ENST00000465514 OSBP2Q969R2 916 aa11.59□□□□□ -0.55
USP39-212ENST00000465514 CRBNQ96SW2 442 aa11.59□□□□□ -0.55
USP39-212ENST00000465514 POP1Q99575 1024 aaKnown RBP11.59□□□□□ -0.55
USP39-212ENST00000465514 RAD9AQ99638 391 aa11.59□□□□□ -0.55
USP39-212ENST00000465514 MKNK2Q9HBH9 465 aa11.59□□□□□ -0.55
USP39-212ENST00000465514 FBXO40Q9UH90 709 aa11.59□□□□□ -0.55
USP39-212ENST00000465514 SOWAHBA6NEL2 793 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 RNF113AO15541 343 aaKnown RBP11.58□□□□□ -0.56
USP39-212ENST00000465514 ZBED4O75132 1171 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 MYL3P08590 195 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 BFSP2Q13515 415 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 COL19A1Q14993 1142 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 CLUL1Q15846 466 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 PKN1Q16512 942 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 TCEAL5Q5H9L2 206 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 TSHZ3Q63HK5 1081 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 FAM117BQ6P1L5 589 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 GIMAP6Q6P9H5 292 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 TRIM67Q6ZTA4 783 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 EEPD1Q7L9B9 569 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 PRPF38AQ8NAV1 312 aaKnown RBP11.58□□□□□ -0.56
USP39-212ENST00000465514 CHST13Q8NET6 341 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 ATOH1Q92858 354 aaPredicted RBP11.58□□□□□ -0.56
USP39-212ENST00000465514 DCTPP1Q9H773 170 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 NYAP2Q9P242 653 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 Q9Y3F1 56 aa11.58□□□□□ -0.56
USP39-212ENST00000465514 CTDP1Q9Y5B0 961 aaPredicted RBP11.58□□□□□ -0.56
USP39-212ENST00000465514 ASB14A6NK59 587 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 F5H6K3 240 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 RBAK-RBAKDNI3L0D1 243 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 KLRC3Q07444 240 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 SMAD2Q15796 467 aaKnown RBP11.57□□□□□ -0.56
USP39-212ENST00000465514 PTPROQ16827 1216 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 TCTN1Q2MV58 587 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 NBPF20Q3BBV1 942 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 IQSEC1Q6DN90 963 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 TAPT1Q6NXT6 567 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 ASCL5Q7RTU5 278 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 FBXL6Q8N531 539 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 BANK1Q8NDB2 785 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 APPBP2Q92624 585 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 KIFC2Q96AC6 838 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 GPATCH3Q96I76 525 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 SLC38A10Q9HBR0 1119 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 CLDND1Q9NY35 253 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 CLIP2Q9UDT6 1046 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 CTNNA3Q9UI47 895 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 ZNF292O60281 2723 aa11.57□□□□□ -0.56
USP39-212ENST00000465514 M0R2C6 588 aa11.56□□□□□ -0.56
USP39-212ENST00000465514 GPAA1O43292 621 aa11.56□□□□□ -0.56
USP39-212ENST00000465514 NDUFB10O96000 172 aa11.56□□□□□ -0.56
USP39-212ENST00000465514 APPP05067 770 aa11.56□□□□□ -0.56
USP39-212ENST00000465514 ZFYP08048 801 aaPredicted RBP11.56□□□□□ -0.56
USP39-212ENST00000465514 TDO2P48775 406 aa11.56□□□□□ -0.56
USP39-212ENST00000465514 VCPP55072 806 aaKnown RBP11.56□□□□□ -0.56
USP39-212ENST00000465514 GPNMBQ14956 572 aa11.56□□□□□ -0.56
USP39-212ENST00000465514 LRRFIP1Q32MZ4 808 aaKnown RBP11.56□□□□□ -0.56
USP39-212ENST00000465514 CNKSR3Q6P9H4 555 aa11.56□□□□□ -0.56
USP39-212ENST00000465514 RPAINQ86UA6 219 aa11.56□□□□□ -0.56
USP39-212ENST00000465514 ZNF444Q8N0Y2 327 aaPredicted RBP11.56□□□□□ -0.56
USP39-212ENST00000465514 MTG1Q9BT17 334 aaPredicted RBP11.56□□□□□ -0.56
USP39-212ENST00000465514 EPB41L4AQ9HCS5 686 aaPredicted RBP11.56□□□□□ -0.56
USP39-212ENST00000465514 A1CFQ9NQ94 594 aaKnown RBP11.56□□□□□ -0.56
USP39-212ENST00000465514 NOD1Q9Y239 953 aa11.56□□□□□ -0.56
USP39-212ENST00000465514 NCOR2Q9Y618 2525 aa11.56□□□□□ -0.56
USP39-212ENST00000465514 ZFHX4Q86UP3 3567 aa11.56□□□□□ -0.56
USP39-212ENST00000465514 TPRP12270 2363 aaKnown RBP11.55□□□□□ -0.56
USP39-212ENST00000465514 IGKV6D-41A0A0C4DH26 115 aa11.55□□□□□ -0.56
USP39-212ENST00000465514 PATL2C9JE40 543 aaKnown RBP11.55□□□□□ -0.56
USP39-212ENST00000465514 PRDM1O75626 825 aa11.55□□□□□ -0.56
USP39-212ENST00000465514 GNAT2P19087 354 aa11.55□□□□□ -0.56
USP39-212ENST00000465514 LTBRP36941 435 aa11.55□□□□□ -0.56
USP39-212ENST00000465514 CPT1AP50416 773 aa11.55□□□□□ -0.56
USP39-212ENST00000465514 NFRKBQ6P4R8 1299 aa11.55□□□□□ -0.56
USP39-212ENST00000465514 KIAA1211Q6ZU35 1233 aa11.55□□□□□ -0.56
USP39-212ENST00000465514 SP7Q8TDD2 431 aaPredicted RBP11.55□□□□□ -0.56
USP39-212ENST00000465514 MKL1Q969V6 931 aa11.55□□□□□ -0.56
USP39-212ENST00000465514 NSUN3Q9H649 340 aaKnown RBP11.55□□□□□ -0.56
USP39-212ENST00000465514 ACAD9Q9H845 621 aa11.55□□□□□ -0.56
USP39-212ENST00000465514 GPHNQ9NQX3 736 aaPredicted RBP11.55□□□□□ -0.56
USP39-212ENST00000465514 PRR23AA6NEV1 266 aa11.54□□□□□ -0.56
USP39-212ENST00000465514 PROB1E7EW31 1015 aa11.54□□□□□ -0.56
USP39-212ENST00000465514 H0Y858 1186 aa11.54□□□□□ -0.56
USP39-212ENST00000465514 STXBP3O00186 592 aa11.54□□□□□ -0.56
USP39-212ENST00000465514 MBTPS2O43462 519 aa11.54□□□□□ -0.56
USP39-212ENST00000465514 KRT37O76014 449 aa11.54□□□□□ -0.56
USP39-212ENST00000465514 RGS20O76081 388 aa11.54□□□□□ -0.56
USP39-212ENST00000465514 ID4P47928 161 aa11.54□□□□□ -0.56
USP39-212ENST00000465514 OAZ1P54368 228 aa11.54□□□□□ -0.56
USP39-212ENST00000465514 DUSP28Q4G0W2 176 aa11.54□□□□□ -0.56
USP39-212ENST00000465514 EPC2Q52LR7 807 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms