RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SPC25Q9HBM1 224 aa15.03■□□□□ -0
XRN1-203ENST00000463916 REC8O95072 547 aa15.02■□□□□ -0
XRN1-203ENST00000463916 ARIH2O95376 493 aa15.02■□□□□ -0
XRN1-203ENST00000463916 EIF2AK2P19525 551 aaKnown RBP15.02■□□□□ -0
XRN1-203ENST00000463916 SMARCA1P28370 1054 aa15.02■□□□□ -0
XRN1-203ENST00000463916 FSCN1Q16658 493 aaKnown RBP15.02■□□□□ -0
XRN1-203ENST00000463916 SH3RF1Q7Z6J0 888 aa15.02■□□□□ -0
XRN1-203ENST00000463916 PCSK9Q8NBP7 692 aaKnown RBP15.02■□□□□ -0
XRN1-203ENST00000463916 JAKMIP1Q96N16 626 aaKnown RBP15.02■□□□□ -0
XRN1-203ENST00000463916 STARD7Q9NQZ5 370 aa15.02■□□□□ -0
XRN1-203ENST00000463916 CALM1P0DP23 149 aa15.02□□□□□ -0.01
XRN1-203ENST00000463916 CALM2P0DP24 149 aa15.02□□□□□ -0.01
XRN1-203ENST00000463916 CALM3P0DP25 149 aa15.02□□□□□ -0.01
XRN1-203ENST00000463916 CXCL17Q6UXB2 119 aa15.02□□□□□ -0.01
XRN1-203ENST00000463916 COPS5Q92905 334 aa15.02□□□□□ -0.01
XRN1-203ENST00000463916 LZTS2Q9BRK4 669 aa15.02□□□□□ -0.01
XRN1-203ENST00000463916 PXMP2Q9NR77 195 aa15.02□□□□□ -0.01
XRN1-203ENST00000463916 GNAQP50148 359 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 MDM2Q00987 491 aaPredicted RBP15.01□□□□□ -0.01
XRN1-203ENST00000463916 ARHGEF16Q5VV41 709 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 TMTC3Q6ZXV5 915 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 RRP36Q96EU6 259 aaKnown RBP15.01□□□□□ -0.01
XRN1-203ENST00000463916 USP26Q9BXU7 913 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 AP5M1Q9H0R1 490 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 Q9Y3F1 56 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 TRIM43BA6NCK2 446 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 PQBP1O60828 265 aaKnown RBP15.01□□□□□ -0.01
XRN1-203ENST00000463916 NR3C2P08235 984 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 CCDC62Q6P9F0 684 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 SEPT14Q6ZU15 432 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 IL31RAQ8NI17 732 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 SCFD2Q8WU76 684 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 TRIM43Q96BQ3 446 aaPredicted RBP15.01□□□□□ -0.01
XRN1-203ENST00000463916 GLT1D1Q96MS3 346 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 IWS1Q96ST2 819 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 MPHOSPH6Q99547 160 aaKnown RBP15.01□□□□□ -0.01
XRN1-203ENST00000463916 PDLIM7Q9NR12 457 aa15.01□□□□□ -0.01
XRN1-203ENST00000463916 FAM217BQ9NTX9 383 aaPredicted RBP15.01□□□□□ -0.01
XRN1-203ENST00000463916 ELP1O95163 1332 aa15□□□□□ -0.01
XRN1-203ENST00000463916 GCOM1H8Y6P7 765 aaPredicted RBP15□□□□□ -0.01
XRN1-203ENST00000463916 HMGB1P09429 215 aaKnown RBP15□□□□□ -0.01
XRN1-203ENST00000463916 POLR2MP0CAP2 368 aa15□□□□□ -0.01
XRN1-203ENST00000463916 ITGB8P26012 769 aa15□□□□□ -0.01
XRN1-203ENST00000463916 CDK7P50613 346 aa15□□□□□ -0.01
XRN1-203ENST00000463916 FUT2Q10981 343 aa15□□□□□ -0.01
XRN1-203ENST00000463916 Q6ZUG5 572 aa15□□□□□ -0.01
XRN1-203ENST00000463916 FCHSD1Q86WN1 690 aa15□□□□□ -0.01
XRN1-203ENST00000463916 VTI1AQ96AJ9 217 aa15□□□□□ -0.01
XRN1-203ENST00000463916 ZFP91Q96JP5 570 aaPredicted RBP15□□□□□ -0.01
XRN1-203ENST00000463916 PDCD2LQ9BRP1 358 aa15□□□□□ -0.01
XRN1-203ENST00000463916 PRDM5Q9NQX1 630 aaPredicted RBP15□□□□□ -0.01
XRN1-203ENST00000463916 MAP3K20Q9NYL2 800 aaKnown RBP15□□□□□ -0.01
XRN1-203ENST00000463916 GRIN2DO15399 1336 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 KLF18A0A0U1RQI7 1052 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 B4DLN1 442 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 TXNP10599 105 aaKnown RBP14.99□□□□□ -0.01
XRN1-203ENST00000463916 BMP8BP34820 402 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 FXR1P51114 621 aaKnown RBP eCLIP14.99□□□□□ -0.01
XRN1-203ENST00000463916 MRPL12P52815 198 aaKnown RBP14.99□□□□□ -0.01
XRN1-203ENST00000463916 FAAP100Q0VG06 881 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 TRAF1Q13077 416 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 PPP2R5BQ15173 497 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 STXBP2Q15833 593 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 LY6KQ17RY6 165 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 SYNE3Q6ZMZ3 975 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 ANKRD33Q7Z3H0 272 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 ZBTB43O43298 467 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 RGS20O76081 388 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 CDC27P30260 824 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 APOBRQ0VD83 1088 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 USP17L6PQ6QN14 398 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 BLOC1S2Q6QNY1 142 aa14.99□□□□□ -0.01
XRN1-203ENST00000463916 SEC63Q9UGP8 760 aaKnown RBP14.99□□□□□ -0.01
XRN1-203ENST00000463916 MEIS2O14770 477 aa14.98□□□□□ -0.01
XRN1-203ENST00000463916 EIF3JO75822 258 aaKnown RBP14.98□□□□□ -0.01
XRN1-203ENST00000463916 CASTP20810 708 aaKnown RBP14.98□□□□□ -0.01
XRN1-203ENST00000463916 RPS6KB1P23443 525 aa14.98□□□□□ -0.01
XRN1-203ENST00000463916 PGM5Q15124 567 aa14.98□□□□□ -0.01
XRN1-203ENST00000463916 VSIG10LQ86VR7 867 aa14.98□□□□□ -0.01
XRN1-203ENST00000463916 SAMD3Q8N6K7 520 aa14.98□□□□□ -0.01
XRN1-203ENST00000463916 OR6J1Q8NGC5 347 aa14.98□□□□□ -0.01
XRN1-203ENST00000463916 BRF1Q92994 677 aa14.98□□□□□ -0.01
XRN1-203ENST00000463916 ARVCFO00192 962 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 CLTBP09497 229 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 MYCLP12524 364 aaPredicted RBP14.97□□□□□ -0.01
XRN1-203ENST00000463916 PSMC6P62333 389 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 TTLL4Q14679 1199 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 RTN1Q16799 776 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 TOX2Q96NM4 488 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 PRKAG2Q9UGJ0 569 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 KIAA1217Q5T5P2 1943 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 CNTNAP5Q8WYK1 1306 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 LTBP2Q14767 1821 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 ADD1P35611 737 aaKnown RBP14.97□□□□□ -0.01
XRN1-203ENST00000463916 FGD1P98174 961 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 SLC43A3Q8NBI5 491 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 GPKOWQ92917 476 aaPredicted RBP eCLIP14.97□□□□□ -0.01
XRN1-203ENST00000463916 BADQ92934 168 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 AGXT2Q9BYV1 514 aa14.97□□□□□ -0.01
XRN1-203ENST00000463916 UBE2OQ9C0C9 1292 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms