RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TTBK2Q6IQ55 1244 aa17.08■□□□□ 0.32
SMC1A-204ENST00000463684 RNF207Q6ZRF8 634 aa17.08■□□□□ 0.32
SMC1A-204ENST00000463684 RASGRP2Q7LDG7 609 aa17.08■□□□□ 0.32
SMC1A-204ENST00000463684 CAGE1Q8TC20 777 aa17.08■□□□□ 0.32
SMC1A-204ENST00000463684 PNMA2Q9UL42 364 aa17.08■□□□□ 0.32
SMC1A-204ENST00000463684 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.08■□□□□ 0.32
SMC1A-204ENST00000463684 FAM86C2PA6NEL3 165 aa17.07■□□□□ 0.32
SMC1A-204ENST00000463684 WDR5P61964 334 aaKnown RBP17.07■□□□□ 0.32
SMC1A-204ENST00000463684 BTNL9Q6UXG8 535 aa17.07■□□□□ 0.32
SMC1A-204ENST00000463684 SLC30A10Q6XR72 485 aa17.07■□□□□ 0.32
SMC1A-204ENST00000463684 DNERQ8NFT8 737 aa17.07■□□□□ 0.32
SMC1A-204ENST00000463684 AFAP1L1Q8TED9 768 aa17.07■□□□□ 0.32
SMC1A-204ENST00000463684 COPS5Q92905 334 aa17.07■□□□□ 0.32
SMC1A-204ENST00000463684 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMC1A-204ENST00000463684 FSD1Q9BTV5 496 aa17.07■□□□□ 0.32
SMC1A-204ENST00000463684 INCENPQ9NQS7 918 aa17.07■□□□□ 0.32
SMC1A-204ENST00000463684 PRRC2BQ5JSZ5 2229 aaKnown RBP17.06■□□□□ 0.32
SMC1A-204ENST00000463684 PARNO95453 639 aaKnown RBP17.06■□□□□ 0.32
SMC1A-204ENST00000463684 ZMYM1Q5SVZ6 1142 aa17.06■□□□□ 0.32
SMC1A-204ENST00000463684 GDPD5Q8WTR4 605 aa17.06■□□□□ 0.32
SMC1A-204ENST00000463684 GPCPD1Q9NPB8 672 aa17.06■□□□□ 0.32
SMC1A-204ENST00000463684 C11orf16Q9NQ32 467 aa17.06■□□□□ 0.32
SMC1A-204ENST00000463684 LCHNA4D1U4 455 aa17.05■□□□□ 0.32
SMC1A-204ENST00000463684 SELPP16109 830 aa17.05■□□□□ 0.32
SMC1A-204ENST00000463684 NOVP48745 357 aa17.05■□□□□ 0.32
SMC1A-204ENST00000463684 RPS6P62753 249 aaKnown RBP17.05■□□□□ 0.32
SMC1A-204ENST00000463684 CNKSR3Q6P9H4 555 aa17.05■□□□□ 0.32
SMC1A-204ENST00000463684 SPRED2Q7Z698 418 aa17.05■□□□□ 0.32
SMC1A-204ENST00000463684 CLEC4DQ8WXI8 215 aa17.05■□□□□ 0.32
SMC1A-204ENST00000463684 TGS1Q96RS0 853 aaKnown RBP17.05■□□□□ 0.32
SMC1A-204ENST00000463684 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
SMC1A-204ENST00000463684 RAD9AQ99638 391 aa17.05■□□□□ 0.32
SMC1A-204ENST00000463684 DCTPP1Q9H773 170 aa17.05■□□□□ 0.32
SMC1A-204ENST00000463684 TOMM22Q9NS69 142 aa17.05■□□□□ 0.32
SMC1A-204ENST00000463684 MTUS1Q9ULD2 1270 aa17.05■□□□□ 0.32
SMC1A-204ENST00000463684 FRMPD2Q68DX3 1309 aaPredicted RBP17.04■□□□□ 0.32
SMC1A-204ENST00000463684 TOP1P11387 765 aaKnown RBP17.04■□□□□ 0.32
SMC1A-204ENST00000463684 EDNRBP24530 442 aa17.04■□□□□ 0.32
SMC1A-204ENST00000463684 LRRC8DQ7L1W4 858 aa17.04■□□□□ 0.32
SMC1A-204ENST00000463684 TMCO2Q7Z6W1 182 aaPredicted RBP17.04■□□□□ 0.32
SMC1A-204ENST00000463684 UBE2ZQ9H832 354 aaPredicted RBP17.04■□□□□ 0.32
SMC1A-204ENST00000463684 SUGCTQ9HAC7 445 aa17.04■□□□□ 0.32
SMC1A-204ENST00000463684 CD320Q9NPF0 282 aa17.04■□□□□ 0.32
SMC1A-204ENST00000463684 TTC41PQ6P2S7 1318 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.03■□□□□ 0.32
SMC1A-204ENST00000463684 ABHD14A-ACY1A0A1B0GW23 586 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 PRR33A8MZF0 331 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 EFCAB14O75071 495 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 CASTP20810 708 aaKnown RBP17.03■□□□□ 0.32
SMC1A-204ENST00000463684 ERVK-21P61565 698 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 DEFB103AP81534 67 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 IKBKEQ14164 716 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 GDF6Q6KF10 455 aaPredicted RBP17.03■□□□□ 0.32
SMC1A-204ENST00000463684 SESTD1Q86VW0 696 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 GJD3Q8N144 294 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 AFG1LQ8WV93 481 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 ANAPC4Q9UJX5 808 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 SCN5AQ14524 2016 aa17.03■□□□□ 0.32
SMC1A-204ENST00000463684 ORC4O43929 436 aa17.02■□□□□ 0.32
SMC1A-204ENST00000463684 GJB5O95377 273 aa17.02■□□□□ 0.32
SMC1A-204ENST00000463684 GH1P01241 217 aa17.02■□□□□ 0.32
SMC1A-204ENST00000463684 SSTR3P32745 418 aaPredicted RBP17.02■□□□□ 0.32
SMC1A-204ENST00000463684 GPNMBQ14956 572 aa17.02■□□□□ 0.32
SMC1A-204ENST00000463684 LEXMQ3ZCV2 418 aa17.02■□□□□ 0.32
SMC1A-204ENST00000463684 ALYREFQ86V81 257 aaKnown RBP17.02■□□□□ 0.32
SMC1A-204ENST00000463684 FAM178BQ8IXR5 827 aa17.02■□□□□ 0.32
SMC1A-204ENST00000463684 TMEM47Q9BQJ4 181 aa17.02■□□□□ 0.32
SMC1A-204ENST00000463684 ARIH2O95376 493 aa17.01■□□□□ 0.31
SMC1A-204ENST00000463684 CXCL10P02778 98 aa17.01■□□□□ 0.31
SMC1A-204ENST00000463684 MMP3P08254 477 aa17.01■□□□□ 0.31
SMC1A-204ENST00000463684 CKBP12277 381 aa17.01■□□□□ 0.31
SMC1A-204ENST00000463684 ALADP13716 330 aa17.01■□□□□ 0.31
SMC1A-204ENST00000463684 KCNA5P22460 613 aa17.01■□□□□ 0.31
SMC1A-204ENST00000463684 RRP12Q5JTH9 1297 aaKnown RBP17.01■□□□□ 0.31
SMC1A-204ENST00000463684 CHST3Q7LGC8 479 aa17.01■□□□□ 0.31
SMC1A-204ENST00000463684 C7orf31Q8N865 590 aa17.01■□□□□ 0.31
SMC1A-204ENST00000463684 RGS22Q8NE09 1264 aa17.01■□□□□ 0.31
SMC1A-204ENST00000463684 UIMC1Q96RL1 719 aa17.01■□□□□ 0.31
SMC1A-204ENST00000463684 WDR19Q8NEZ3 1342 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 LINC01553A4QN01 128 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 NBNO60934 754 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 PDHBP11177 359 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 RBL2Q08999 1139 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 DGKDQ16760 1214 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 LY6KQ17RY6 165 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 CSPP1Q1MSJ5 1256 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 FAM117BQ6P1L5 589 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 CCDC62Q6P9F0 684 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 SEPT14Q6ZU15 432 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 PI4K2BQ8TCG2 481 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 CTAGE1Q96RT6 745 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 TCP11L1Q9NUJ3 509 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 GTF2IRD1Q9UHL9 959 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 CTNNA3Q9UI47 895 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 INSL6Q9Y581 213 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 SCN10AQ9Y5Y9 1956 aa17■□□□□ 0.31
SMC1A-204ENST00000463684 FOXP2O15409 715 aa16.99■□□□□ 0.31
SMC1A-204ENST00000463684 FGRP09769 529 aa16.99■□□□□ 0.31
SMC1A-204ENST00000463684 ZNF543Q08ER8 600 aa16.99■□□□□ 0.31
SMC1A-204ENST00000463684 PUS10Q3MIT2 529 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 391.1 ms