RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 CDX2Q99626 313 aaPredicted RBP22.47■■□□□ 1.19
TSC2-209ENST00000463601 SENP2Q9HC62 589 aa22.47■■□□□ 1.19
TSC2-209ENST00000463601 ABCB11O95342 1321 aa22.47■■□□□ 1.19
TSC2-209ENST00000463601 KIAA1217Q5T5P2 1943 aa22.47■■□□□ 1.19
TSC2-209ENST00000463601 ARIH2O95376 493 aa22.46■■□□□ 1.19
TSC2-209ENST00000463601 MYL3P08590 195 aa22.46■■□□□ 1.19
TSC2-209ENST00000463601 TRDNQ13061 729 aa22.46■■□□□ 1.19
TSC2-209ENST00000463601 NECTIN1Q15223 517 aa22.46■■□□□ 1.19
TSC2-209ENST00000463601 TMEM199Q8N511 208 aa22.46■■□□□ 1.19
TSC2-209ENST00000463601 SCN10AQ9Y5Y9 1956 aa22.46■■□□□ 1.19
TSC2-209ENST00000463601 PRUNE2Q8WUY3 3088 aa22.46■■□□□ 1.19
TSC2-209ENST00000463601 PURAQ00577 322 aaKnown RBP22.45■■□□□ 1.18
TSC2-209ENST00000463601 PPP2R5BQ15173 497 aa22.45■■□□□ 1.18
TSC2-209ENST00000463601 SLC35G1Q2M3R5 365 aa22.45■■□□□ 1.18
TSC2-209ENST00000463601 ZNF365Q70YC5 407 aa22.45■■□□□ 1.18
TSC2-209ENST00000463601 FBXO11Q86XK2 927 aa22.45■■□□□ 1.18
TSC2-209ENST00000463601 NCOA7Q8NI08 942 aa22.45■■□□□ 1.18
TSC2-209ENST00000463601 SCFD2Q8WU76 684 aa22.45■■□□□ 1.18
TSC2-209ENST00000463601 NOC4LQ9BVI4 516 aaKnown RBP22.45■■□□□ 1.18
TSC2-209ENST00000463601 HIPK3Q9H422 1215 aa22.45■■□□□ 1.18
TSC2-209ENST00000463601 MAD2L2Q9UI95 211 aa22.45■■□□□ 1.18
TSC2-209ENST00000463601 GRXCR1A8MXD5 290 aa22.44■■□□□ 1.18
TSC2-209ENST00000463601 SLC27A2O14975 620 aa22.44■■□□□ 1.18
TSC2-209ENST00000463601 PPP1R11O60927 126 aaPredicted RBP22.44■■□□□ 1.18
TSC2-209ENST00000463601 TXNP10599 105 aaKnown RBP22.44■■□□□ 1.18
TSC2-209ENST00000463601 CPT1AP50416 773 aa22.44■■□□□ 1.18
TSC2-209ENST00000463601 MPHOSPH6Q99547 160 aaKnown RBP22.44■■□□□ 1.18
TSC2-209ENST00000463601 ALDH8A1Q9H2A2 487 aaPredicted RBP22.44■■□□□ 1.18
TSC2-209ENST00000463601 TRMT13Q9NUP7 481 aaKnown RBP22.44■■□□□ 1.18
TSC2-209ENST00000463601 POLR3EQ9NVU0 708 aa22.44■■□□□ 1.18
TSC2-209ENST00000463601 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.43■■□□□ 1.18
TSC2-209ENST00000463601 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.43■■□□□ 1.18
TSC2-209ENST00000463601 KLRF2D3W0D1 207 aa22.43■■□□□ 1.18
TSC2-209ENST00000463601 OPLAHO14841 1288 aa22.43■■□□□ 1.18
TSC2-209ENST00000463601 CCL23P55773 120 aa22.43■■□□□ 1.18
TSC2-209ENST00000463601 RASIP1Q5U651 963 aa22.43■■□□□ 1.18
TSC2-209ENST00000463601 CREB3L3Q68CJ9 461 aa22.43■■□□□ 1.18
TSC2-209ENST00000463601 CHST3Q7LGC8 479 aa22.43■■□□□ 1.18
TSC2-209ENST00000463601 RALYLQ86SE5 291 aaKnown RBP22.43■■□□□ 1.18
TSC2-209ENST00000463601 MYLIPQ8WY64 445 aa22.43■■□□□ 1.18
TSC2-209ENST00000463601 WNT8AQ9H1J5 351 aa22.43■■□□□ 1.18
TSC2-209ENST00000463601 SCN5AQ14524 2016 aa22.42■■□□□ 1.18
TSC2-209ENST00000463601 PALM3A6NDB9 673 aaPredicted RBP22.42■■□□□ 1.18
TSC2-209ENST00000463601 CCDC62Q6P9F0 684 aa22.42■■□□□ 1.18
TSC2-209ENST00000463601 SEPT14Q6ZU15 432 aa22.42■■□□□ 1.18
TSC2-209ENST00000463601 MB21D2Q8IYB1 491 aaPredicted RBP22.42■■□□□ 1.18
TSC2-209ENST00000463601 MTMR8Q96EF0 704 aa22.42■■□□□ 1.18
TSC2-209ENST00000463601 RMDN3Q96TC7 470 aa22.42■■□□□ 1.18
TSC2-209ENST00000463601 MTG1Q9BT17 334 aaPredicted RBP22.42■■□□□ 1.18
TSC2-209ENST00000463601 IL23AQ9NPF7 189 aa22.42■■□□□ 1.18
TSC2-209ENST00000463601 MRPL11Q9Y3B7 192 aaKnown RBP22.42■■□□□ 1.18
TSC2-209ENST00000463601 GBF1Q92538 1859 aa22.42■■□□□ 1.18
TSC2-209ENST00000463601 A6NJR5 290 aa22.41■■□□□ 1.18
TSC2-209ENST00000463601 NKRFO15226 690 aaKnown RBP eCLIP22.41■■□□□ 1.18
TSC2-209ENST00000463601 CYP2C9P11712 490 aa22.41■■□□□ 1.18
TSC2-209ENST00000463601 DNAJB2P25686 324 aa22.41■■□□□ 1.18
TSC2-209ENST00000463601 PBX2P40425 430 aa22.41■■□□□ 1.18
TSC2-209ENST00000463601 TTLL4Q14679 1199 aa22.41■■□□□ 1.18
TSC2-209ENST00000463601 MCF2L2Q86YR7 1114 aa22.41■■□□□ 1.18
TSC2-209ENST00000463601 NSUN6Q8TEA1 469 aaKnown RBP22.41■■□□□ 1.18
TSC2-209ENST00000463601 AMNQ9BXJ7 453 aa22.41■■□□□ 1.18
TSC2-209ENST00000463601 SEZ6LQ9BYH1 1024 aa22.41■■□□□ 1.18
TSC2-209ENST00000463601 CXXC1Q9P0U4 656 aaPredicted RBP22.41■■□□□ 1.18
TSC2-209ENST00000463601 CHD9Q3L8U1 2897 aa22.41■■□□□ 1.18
TSC2-209ENST00000463601 MYH7BA7E2Y1 1941 aa22.41■■□□□ 1.18
TSC2-209ENST00000463601 B4DLN1 442 aa22.4■■□□□ 1.18
TSC2-209ENST00000463601 DLL1O00548 723 aa22.4■■□□□ 1.18
TSC2-209ENST00000463601 IFIT3O14879 490 aaKnown RBP22.4■■□□□ 1.18
TSC2-209ENST00000463601 CFBP00751 764 aa22.4■■□□□ 1.18
TSC2-209ENST00000463601 EIF2AK2P19525 551 aaKnown RBP22.4■■□□□ 1.18
TSC2-209ENST00000463601 MRPL12P52815 198 aaKnown RBP22.4■■□□□ 1.18
TSC2-209ENST00000463601 ANTXR2P58335 489 aa22.4■■□□□ 1.18
TSC2-209ENST00000463601 GRM4Q14833 912 aa22.4■■□□□ 1.18
TSC2-209ENST00000463601 LY6KQ17RY6 165 aa22.4■■□□□ 1.18
TSC2-209ENST00000463601 NBPF20Q3BBV1 942 aa22.4■■□□□ 1.18
TSC2-209ENST00000463601 PSRC1Q6PGN9 363 aaPredicted RBP22.4■■□□□ 1.18
TSC2-209ENST00000463601 VWCEQ96DN2 955 aa22.4■■□□□ 1.18
TSC2-209ENST00000463601 SCLYQ96I15 445 aa22.4■■□□□ 1.18
TSC2-209ENST00000463601 GPHNQ9NQX3 736 aaPredicted RBP22.4■■□□□ 1.18
TSC2-209ENST00000463601 MYO9BQ13459 2157 aa22.4■■□□□ 1.18
TSC2-209ENST00000463601 GRIN2CQ14957 1233 aa22.39■■□□□ 1.17
TSC2-209ENST00000463601 MAF1Q9H063 256 aa22.39■■□□□ 1.17
TSC2-209ENST00000463601 CUL9Q8IWT3 2517 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 ZBTB5O15062 677 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 HSD17B4P51659 736 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 ARHGAP1Q07960 439 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 STXBP2Q15833 593 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 BRDTQ58F21 947 aaPredicted RBP22.38■■□□□ 1.17
TSC2-209ENST00000463601 FAM47CQ5HY64 1035 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 RNF20Q5VTR2 975 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 ARHGEF16Q5VV41 709 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 HOMER1Q86YM7 354 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 AFG1LQ8WV93 481 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 HERVK_113Q902F9 699 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 PIGSQ96S52 555 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 IWS1Q96ST2 819 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 PBX4Q9BYU1 374 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 PXMP2Q9NR77 195 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 PCDHA1Q9Y5I3 950 aa22.38■■□□□ 1.17
TSC2-209ENST00000463601 TRIP12Q14669 1992 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms