RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 KIAA1217Q5T5P2 1943 aa25.78■■□□□ 1.72
PDLIM7-206ENST00000463411 PALM3A6NDB9 673 aaPredicted RBP25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 ZBTB5O15062 677 aa25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 KPNA6O60684 536 aa25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 CFBP00751 764 aa25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 CSF2RAP15509 400 aa25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 PURAQ00577 322 aaKnown RBP25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 GRM4Q14833 912 aa25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 STXBP2Q15833 593 aa25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 ARHGEF16Q5VV41 709 aa25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 PSRC1Q6PGN9 363 aaPredicted RBP25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 TBC1D5Q92609 795 aa25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 MAP4K1Q92918 833 aa25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 MTG1Q9BT17 334 aaPredicted RBP25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 RBM8AQ9Y5S9 174 aaKnown RBP25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 GRIN2DO15399 1336 aa25.77■■□□□ 1.72
PDLIM7-206ENST00000463411 TMEM67Q5HYA8 995 aa25.76■■□□□ 1.71
PDLIM7-206ENST00000463411 HOMER1Q86YM7 354 aa25.76■■□□□ 1.71
PDLIM7-206ENST00000463411 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.76■■□□□ 1.719e-10■■■□□ 16.1
PDLIM7-206ENST00000463411 COL20A1Q9P218 1284 aa25.76■■□□□ 1.71
PDLIM7-206ENST00000463411 B4GALT4O60513 344 aa25.75■■□□□ 1.71
PDLIM7-206ENST00000463411 CYP2C18P33260 490 aa25.75■■□□□ 1.71
PDLIM7-206ENST00000463411 STOX1Q6ZVD7 989 aa25.75■■□□□ 1.71
PDLIM7-206ENST00000463411 CATIPQ7Z7H3 387 aa25.75■■□□□ 1.71
PDLIM7-206ENST00000463411 SLC17A8Q8NDX2 589 aa25.75■■□□□ 1.71
PDLIM7-206ENST00000463411 MTMR8Q96EF0 704 aa25.75■■□□□ 1.71
PDLIM7-206ENST00000463411 TRPV6Q9H1D0 765 aa25.75■■□□□ 1.71
PDLIM7-206ENST00000463411 ALDH8A1Q9H2A2 487 aaPredicted RBP25.75■■□□□ 1.71
PDLIM7-206ENST00000463411 MAP3K20Q9NYL2 800 aaKnown RBP25.75■■□□□ 1.71
PDLIM7-206ENST00000463411 PCDHA1Q9Y5I3 950 aa25.75■■□□□ 1.71
PDLIM7-206ENST00000463411 TAF6LQ9Y6J9 622 aa25.75■■□□□ 1.71
PDLIM7-206ENST00000463411 A6NJR5 290 aa25.74■■□□□ 1.71
PDLIM7-206ENST00000463411 SUPT20HL2P0C7V6 817 aa25.74■■□□□ 1.71
PDLIM7-206ENST00000463411 EIF2AK2P19525 551 aaKnown RBP25.74■■□□□ 1.71
PDLIM7-206ENST00000463411 SEPT14Q6ZU15 432 aa25.74■■□□□ 1.71
PDLIM7-206ENST00000463411 CHST3Q7LGC8 479 aa25.74■■□□□ 1.71
PDLIM7-206ENST00000463411 COPS5Q92905 334 aa25.74■■□□□ 1.71
PDLIM7-206ENST00000463411 GUCD1Q96NT3 240 aa25.74■■□□□ 1.71
PDLIM7-206ENST00000463411 SCN10AQ9Y5Y9 1956 aa25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 TMEM265A0A087WTH1 108 aa25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 HSD17B4P51659 736 aa25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 FAM47CQ5HY64 1035 aa25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 TMEM240Q5SV17 173 aa25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 CASC1Q6TDU7 716 aa25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 MB21D2Q8IYB1 491 aaPredicted RBP25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 SAMD3Q8N6K7 520 aa25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 NOC4LQ9BVI4 516 aaKnown RBP25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 MTIF3Q9H2K0 278 aaKnown RBP25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 IL23AQ9NPF7 189 aa25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 PXMP2Q9NR77 195 aa25.73■■□□□ 1.71
PDLIM7-206ENST00000463411 ARIH2O95376 493 aa25.72■■□□□ 1.71
PDLIM7-206ENST00000463411 GH1P01241 217 aa25.72■■□□□ 1.71
PDLIM7-206ENST00000463411 GHRHRQ02643 423 aa25.72■■□□□ 1.71
PDLIM7-206ENST00000463411 PIGSQ96S52 555 aa25.72■■□□□ 1.71
PDLIM7-206ENST00000463411 RIOX1Q9H6W3 641 aa25.72■■□□□ 1.71
PDLIM7-206ENST00000463411 SENP2Q9HC62 589 aa25.72■■□□□ 1.71
PDLIM7-206ENST00000463411 PPP1R11O60927 126 aaPredicted RBP25.71■■□□□ 1.71
PDLIM7-206ENST00000463411 EIF3JO75822 258 aaKnown RBP25.71■■□□□ 1.71
PDLIM7-206ENST00000463411 ACRP10323 421 aa25.71■■□□□ 1.71
PDLIM7-206ENST00000463411 ANTXR2P58335 489 aa25.71■■□□□ 1.71
PDLIM7-206ENST00000463411 TROAPQ12815 778 aa25.71■■□□□ 1.71
PDLIM7-206ENST00000463411 CCDC62Q6P9F0 684 aa25.71■■□□□ 1.71
PDLIM7-206ENST00000463411 ZNF365Q70YC5 407 aa25.71■■□□□ 1.71
PDLIM7-206ENST00000463411 ESYT1Q9BSJ8 1104 aa25.71■■□□□ 1.71
PDLIM7-206ENST00000463411 OPLAHO14841 1288 aa25.7■■□□□ 1.7
PDLIM7-206ENST00000463411 NR3C2P08235 984 aa25.7■■□□□ 1.7
PDLIM7-206ENST00000463411 LY6KQ17RY6 165 aa25.7■■□□□ 1.7
PDLIM7-206ENST00000463411 NBPF20Q3BBV1 942 aa25.7■■□□□ 1.7
PDLIM7-206ENST00000463411 NFRKBQ6P4R8 1299 aa25.7■■□□□ 1.7
PDLIM7-206ENST00000463411 C16orf59Q7L2K0 433 aa25.7■■□□□ 1.7
PDLIM7-206ENST00000463411 CTCFLQ8NI51 663 aaPredicted RBP25.7■■□□□ 1.7
PDLIM7-206ENST00000463411 MTA3Q9BTC8 594 aa25.7■■□□□ 1.7
PDLIM7-206ENST00000463411 SEMA6BQ9H3T3 888 aa25.7■■□□□ 1.7
PDLIM7-206ENST00000463411 TRMT13Q9NUP7 481 aaKnown RBP25.7■■□□□ 1.7
PDLIM7-206ENST00000463411 UMODL1Q5DID0 1318 aa25.69■■□□□ 1.7
PDLIM7-206ENST00000463411 PNMA6FA0A0J9YX94 578 aa25.69■■□□□ 1.7
PDLIM7-206ENST00000463411 DDAH1O94760 285 aa25.69■■□□□ 1.7
PDLIM7-206ENST00000463411 CCL23P55773 120 aa25.69■■□□□ 1.7
PDLIM7-206ENST00000463411 PTPN11Q06124 597 aaPredicted RBP25.69■■□□□ 1.7
PDLIM7-206ENST00000463411 IGDCC4Q8TDY8 1250 aa25.69■■□□□ 1.7
PDLIM7-206ENST00000463411 LSG1Q9H089 658 aaKnown RBP25.69■■□□□ 1.7
PDLIM7-206ENST00000463411 MRVI1Q9Y6F6 885 aa25.69■■□□□ 1.7
PDLIM7-206ENST00000463411 GCOM1H8Y6P7 765 aaPredicted RBP25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 PRC1O43663 620 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 MMP3P08254 477 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 POLR2MP0CAP2 368 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 DNAJB2P25686 324 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 KIF5BP33176 963 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 MCM5P33992 734 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 ARHGAP1Q07960 439 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 RPUSD2Q8IZ73 545 aaKnown RBP25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 ZNF654Q8IZM8 581 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 AFG1LQ8WV93 481 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 MAP3K14Q99558 947 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 CDX2Q99626 313 aaPredicted RBP25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 PDCD2LQ9BRP1 358 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 WNT8AQ9H1J5 351 aa25.68■■□□□ 1.7
PDLIM7-206ENST00000463411 TTYH1Q9H313 450 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms