RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 FBXO16Q8IX29 292 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-211ENST00000463372 C11orf84Q9BUA3 381 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-211ENST00000463372 ATP2A1O14983 1001 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 IGSF3O75054 1194 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 ZBED4O75132 1171 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 CTNNB1P35222 781 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 CLCN5P51795 746 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 CHMP4BP1P59074 171 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 ANGPT1Q15389 498 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 TMEM63BQ5T3F8 832 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 TAPT1Q6NXT6 567 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 UBALD2Q8IYN6 164 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 FAM133AQ8N9E0 248 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 CLEC1BQ9P126 229 aa16.19■□□□□ 0.18
C9orf3-211ENST00000463372 CSPG5O95196 566 aa16.18■□□□□ 0.18
C9orf3-211ENST00000463372 RB1P06400 928 aa16.18■□□□□ 0.18
C9orf3-211ENST00000463372 MTMR3Q13615 1198 aa16.18■□□□□ 0.18
C9orf3-211ENST00000463372 DUSP28Q4G0W2 176 aa16.18■□□□□ 0.18
C9orf3-211ENST00000463372 CYP2W1Q8TAV3 490 aa16.18■□□□□ 0.18
C9orf3-211ENST00000463372 RAVER2Q9HCJ3 691 aaKnown RBP16.18■□□□□ 0.18
C9orf3-211ENST00000463372 COG6Q9Y2V7 657 aa16.18■□□□□ 0.18
C9orf3-211ENST00000463372 E9PSI1 815 aa16.17■□□□□ 0.18
C9orf3-211ENST00000463372 GRM6O15303 877 aa16.17■□□□□ 0.18
C9orf3-211ENST00000463372 KPNA6O60684 536 aa16.17■□□□□ 0.18
C9orf3-211ENST00000463372 UBTFL1P0CB47 393 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-211ENST00000463372 ATF7P17544 494 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-211ENST00000463372 PRPF38AQ8NAV1 312 aaKnown RBP16.17■□□□□ 0.18
C9orf3-211ENST00000463372 KREMEN2Q8NCW0 462 aa16.17■□□□□ 0.18
C9orf3-211ENST00000463372 RUBCNQ92622 972 aa16.17■□□□□ 0.18
C9orf3-211ENST00000463372 VTA1Q9NP79 307 aa16.17■□□□□ 0.18
C9orf3-211ENST00000463372 HOMER2Q9NSB8 354 aa16.17■□□□□ 0.18
C9orf3-211ENST00000463372 ZFYVE26Q68DK2 2539 aa16.17■□□□□ 0.18
C9orf3-211ENST00000463372 RAD50Q92878 1312 aa16.17■□□□□ 0.18
C9orf3-211ENST00000463372 FLNBO75369 2602 aaKnown RBP16.16■□□□□ 0.18
C9orf3-211ENST00000463372 C5orf67F2Z3F1 127 aa16.16■□□□□ 0.18
C9orf3-211ENST00000463372 UPP2O95045 317 aa16.16■□□□□ 0.18
C9orf3-211ENST00000463372 CYP2E1P05181 493 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-211ENST00000463372 CKBP12277 381 aa16.16■□□□□ 0.18
C9orf3-211ENST00000463372 EEF2P13639 858 aaKnown RBP16.16■□□□□ 0.18
C9orf3-211ENST00000463372 AKR1B1P15121 316 aa16.16■□□□□ 0.18
C9orf3-211ENST00000463372 DMWDQ09019 674 aa16.16■□□□□ 0.18
C9orf3-211ENST00000463372 OR6J1Q8NGC5 347 aa16.16■□□□□ 0.18
C9orf3-211ENST00000463372 SWAP70Q9UH65 585 aa16.16■□□□□ 0.18
C9orf3-211ENST00000463372 LGR5O75473 907 aa16.15■□□□□ 0.18
C9orf3-211ENST00000463372 RBL2Q08999 1139 aa16.15■□□□□ 0.18
C9orf3-211ENST00000463372 TTC39AQ5SRH9 613 aa16.15■□□□□ 0.18
C9orf3-211ENST00000463372 EFHBQ8N7U6 833 aa16.15■□□□□ 0.18
C9orf3-211ENST00000463372 MCM9Q9NXL9 1143 aa16.15■□□□□ 0.18
C9orf3-211ENST00000463372 SORCS3Q9UPU3 1222 aa16.15■□□□□ 0.18
C9orf3-211ENST00000463372 RWDD3Q9Y3V2 267 aa16.15■□□□□ 0.18
C9orf3-211ENST00000463372 FANCMQ8IYD8 2048 aa16.14■□□□□ 0.17
C9orf3-211ENST00000463372 ADRB1P08588 477 aa16.14■□□□□ 0.17
C9orf3-211ENST00000463372 ATXN1P54253 815 aaKnown RBP16.14■□□□□ 0.17
C9orf3-211ENST00000463372 CCDC105Q8IYK2 499 aa16.14■□□□□ 0.17
C9orf3-211ENST00000463372 FIBCD1Q8N539 461 aa16.14■□□□□ 0.17
C9orf3-211ENST00000463372 WDR11Q9BZH6 1224 aa16.14■□□□□ 0.17
C9orf3-211ENST00000463372 ACAD9Q9H845 621 aa16.14■□□□□ 0.17
C9orf3-211ENST00000463372 BARX2Q9UMQ3 279 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-211ENST00000463372 DDX49Q9Y6V7 483 aaKnown RBP16.14■□□□□ 0.17
C9orf3-211ENST00000463372 MMP1P03956 469 aa16.13■□□□□ 0.17
C9orf3-211ENST00000463372 BMPR1AP36894 532 aa16.13■□□□□ 0.17
C9orf3-211ENST00000463372 EVX2Q03828 476 aa16.13■□□□□ 0.17
C9orf3-211ENST00000463372 GDF6Q6KF10 455 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-211ENST00000463372 DCLK2Q8N568 766 aa16.13■□□□□ 0.17
C9orf3-211ENST00000463372 DHX38Q92620 1227 aaKnown RBP16.13■□□□□ 0.17
C9orf3-211ENST00000463372 TOP1MTQ969P6 601 aa16.13■□□□□ 0.17
C9orf3-211ENST00000463372 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
C9orf3-211ENST00000463372 NUP88Q99567 741 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-211ENST00000463372 KANSL2Q9H9L4 492 aa16.13■□□□□ 0.17
C9orf3-211ENST00000463372 HDAC5Q9UQL6 1122 aa16.13■□□□□ 0.17
C9orf3-211ENST00000463372 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-211ENST00000463372 PTPRCP08575 1304 aa16.13■□□□□ 0.17
C9orf3-211ENST00000463372 IDH1O75874 414 aaKnown RBP16.12■□□□□ 0.17
C9orf3-211ENST00000463372 BRD1O95696 1058 aa16.12■□□□□ 0.17
C9orf3-211ENST00000463372 OAZ1P54368 228 aa16.12■□□□□ 0.17
C9orf3-211ENST00000463372 COL9A3Q14050 684 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-211ENST00000463372 CCDC158Q5M9N0 1113 aa16.12■□□□□ 0.17
C9orf3-211ENST00000463372 FLCNQ8NFG4 579 aa16.12■□□□□ 0.17
C9orf3-211ENST00000463372 DBF4BQ8NFT6 615 aa16.12■□□□□ 0.17
C9orf3-211ENST00000463372 KIFC2Q96AC6 838 aa16.12■□□□□ 0.17
C9orf3-211ENST00000463372 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
C9orf3-211ENST00000463372 A1CFQ9NQ94 594 aaKnown RBP16.12■□□□□ 0.17
C9orf3-211ENST00000463372 PIH1D3Q9NQM4 214 aaKnown RBP16.12■□□□□ 0.17
C9orf3-211ENST00000463372 R4GN57 208 aa16.12■□□□□ 0.17
C9orf3-211ENST00000463372 ASPMQ8IZT6 3477 aa16.12■□□□□ 0.17
C9orf3-211ENST00000463372 EMSYQ7Z589 1322 aa16.12■□□□□ 0.17
C9orf3-211ENST00000463372 CTAGE1Q96RT6 745 aa16.11■□□□□ 0.17
C9orf3-211ENST00000463372 IFIH1Q9BYX4 1025 aaKnown RBP16.11■□□□□ 0.17
C9orf3-211ENST00000463372 CDV3Q9UKY7 258 aaKnown RBP16.11■□□□□ 0.17
C9orf3-211ENST00000463372 SP100P23497 879 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-211ENST00000463372 NRIP1P48552 1158 aa16.1■□□□□ 0.17
C9orf3-211ENST00000463372 ZC3H14Q6PJT7 736 aaKnown RBP16.1■□□□□ 0.17
C9orf3-211ENST00000463372 SESTD1Q86VW0 696 aa16.1■□□□□ 0.17
C9orf3-211ENST00000463372 DTWD2Q8NBA8 298 aa16.1■□□□□ 0.17
C9orf3-211ENST00000463372 SUSD6Q92537 303 aa16.1■□□□□ 0.17
C9orf3-211ENST00000463372 IL17RAQ96F46 866 aa16.1■□□□□ 0.17
C9orf3-211ENST00000463372 DYNLL2Q96FJ2 89 aa16.1■□□□□ 0.17
C9orf3-211ENST00000463372 LCTP09848 1927 aa16.09■□□□□ 0.17
C9orf3-211ENST00000463372 A6NJR5 290 aa16.09■□□□□ 0.17
C9orf3-211ENST00000463372 ZAP70P43403 619 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms