RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 VTI1AQ96AJ9 217 aa15.36■□□□□ 0.05
C9orf3-210ENST00000462125 LRCH3Q96II8 777 aa15.36■□□□□ 0.05
C9orf3-210ENST00000462125 TMEM87BQ96K49 555 aa15.36■□□□□ 0.05
C9orf3-210ENST00000462125 ANO2Q9NQ90 1003 aa15.36■□□□□ 0.05
C9orf3-210ENST00000462125 TMEM39AQ9NV64 488 aa15.36■□□□□ 0.05
C9orf3-210ENST00000462125 PCDHA1Q9Y5I3 950 aa15.36■□□□□ 0.05
C9orf3-210ENST00000462125 PNMA6FA0A0J9YX94 578 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 PRC1O43663 620 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 CD4P01730 458 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 LIFRP42702 1097 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 COL9A3Q14050 684 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-210ENST00000462125 TSGA10IPQ3SY00 556 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 CCDC62Q6P9F0 684 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 CASC1Q6TDU7 716 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 FAM126BQ8IXS8 530 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 CCDC136Q96JN2 1154 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 PIGSQ96S52 555 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 RMDN3Q96TC7 470 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 GPHNQ9NQX3 736 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-210ENST00000462125 TBX21Q9UL17 535 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 GRIN2DO15399 1336 aa15.35■□□□□ 0.05
C9orf3-210ENST00000462125 A6NJR5 290 aa15.34■□□□□ 0.05
C9orf3-210ENST00000462125 SH2B2O14492 632 aaPredicted RBP15.34■□□□□ 0.05
C9orf3-210ENST00000462125 DDAH1O94760 285 aa15.34■□□□□ 0.05
C9orf3-210ENST00000462125 CFBP00751 764 aa15.34■□□□□ 0.05
C9orf3-210ENST00000462125 TIMP1P01033 207 aa15.34■□□□□ 0.05
C9orf3-210ENST00000462125 RAG1P15918 1043 aa15.34■□□□□ 0.05
C9orf3-210ENST00000462125 ITGA7Q13683 1181 aa15.34■□□□□ 0.05
C9orf3-210ENST00000462125 STXBP2Q15833 593 aa15.34■□□□□ 0.05
C9orf3-210ENST00000462125 ZNF654Q8IZM8 581 aa15.34■□□□□ 0.05
C9orf3-210ENST00000462125 LRRC37A2A6NM11 1700 aa15.34■□□□□ 0.05
C9orf3-210ENST00000462125 CDC45O75419 566 aa15.33■□□□□ 0.04
C9orf3-210ENST00000462125 EIF3JO75822 258 aaKnown RBP15.33■□□□□ 0.04
C9orf3-210ENST00000462125 TXNP10599 105 aaKnown RBP15.33■□□□□ 0.04
C9orf3-210ENST00000462125 CPT1AP50416 773 aa15.33■□□□□ 0.04
C9orf3-210ENST00000462125 TTLL4Q14679 1199 aa15.33■□□□□ 0.04
C9orf3-210ENST00000462125 PPP2R5BQ15173 497 aa15.33■□□□□ 0.04
C9orf3-210ENST00000462125 SHHQ15465 462 aa15.33■□□□□ 0.04
C9orf3-210ENST00000462125 RNF20Q5VTR2 975 aa15.33■□□□□ 0.04
C9orf3-210ENST00000462125 HOMER1Q86YM7 354 aa15.33■□□□□ 0.04
C9orf3-210ENST00000462125 SPZ1Q9BXG8 430 aa15.33■□□□□ 0.04
C9orf3-210ENST00000462125 PXMP2Q9NR77 195 aa15.33■□□□□ 0.04
C9orf3-210ENST00000462125 POLR3EQ9NVU0 708 aa15.33■□□□□ 0.04
C9orf3-210ENST00000462125 LTBP2Q14767 1821 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 TLR3O15455 904 aaKnown RBP15.32■□□□□ 0.04
C9orf3-210ENST00000462125 KPNA6O60684 536 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 ARIH2O95376 493 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 NR3C2P08235 984 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 KIF5BP33176 963 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 GNAQP50148 359 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 PURAQ00577 322 aaKnown RBP15.32■□□□□ 0.04
C9orf3-210ENST00000462125 EXOSC10Q01780 885 aaKnown RBP15.32■□□□□ 0.04
C9orf3-210ENST00000462125 C9orf50Q5SZB4 431 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 ARHGEF16Q5VV41 709 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 MFSD5Q6N075 450 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 SGMS1Q86VZ5 419 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 OR6J1Q8NGC5 347 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 CTCFLQ8NI51 663 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-210ENST00000462125 LZTS2Q9BRK4 669 aa15.32■□□□□ 0.04
C9orf3-210ENST00000462125 CCDC69A6NI79 296 aa15.31■□□□□ 0.04
C9orf3-210ENST00000462125 CALM1P0DP23 149 aa15.31■□□□□ 0.04
C9orf3-210ENST00000462125 CALM2P0DP24 149 aa15.31■□□□□ 0.04
C9orf3-210ENST00000462125 CALM3P0DP25 149 aa15.31■□□□□ 0.04
C9orf3-210ENST00000462125 EPHB4P54760 987 aa15.31■□□□□ 0.04
C9orf3-210ENST00000462125 BRDTQ58F21 947 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-210ENST00000462125 VSIG10LQ86VR7 867 aa15.31■□□□□ 0.04
C9orf3-210ENST00000462125 SLC17A8Q8NDX2 589 aa15.31■□□□□ 0.04
C9orf3-210ENST00000462125 COPS5Q92905 334 aa15.31■□□□□ 0.04
C9orf3-210ENST00000462125 NEK1Q96PY6 1258 aa15.31■□□□□ 0.04
C9orf3-210ENST00000462125 PDCD2LQ9BRP1 358 aa15.31■□□□□ 0.04
C9orf3-210ENST00000462125 MYL10Q9BUA6 226 aa15.31■□□□□ 0.04
C9orf3-210ENST00000462125 DDX41Q9UJV9 622 aaKnown RBP15.31■□□□□ 0.04
C9orf3-210ENST00000462125 LAMA2P24043 3122 aaKnown RBP15.3■□□□□ 0.04
C9orf3-210ENST00000462125 GCOM1H8Y6P7 765 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-210ENST00000462125 POLR2MP0CAP2 368 aa15.3■□□□□ 0.04
C9orf3-210ENST00000462125 EIF2AK2P19525 551 aaKnown RBP15.3■□□□□ 0.04
C9orf3-210ENST00000462125 PSMC6P62333 389 aa15.3■□□□□ 0.04
C9orf3-210ENST00000462125 FPGSQ05932 587 aa15.3■□□□□ 0.04
C9orf3-210ENST00000462125 NFXL1Q6ZNB6 911 aa15.3■□□□□ 0.04
C9orf3-210ENST00000462125 SEPT14Q6ZU15 432 aa15.3■□□□□ 0.04
C9orf3-210ENST00000462125 DHX32Q7L7V1 743 aaKnown RBP15.3■□□□□ 0.04
C9orf3-210ENST00000462125 RASEFQ8IZ41 740 aa15.3■□□□□ 0.04
C9orf3-210ENST00000462125 SRBD1Q8N5C6 995 aaKnown RBP15.3■□□□□ 0.04
C9orf3-210ENST00000462125 KCNB2Q92953 911 aa15.3■□□□□ 0.04
C9orf3-210ENST00000462125 MTG1Q9BT17 334 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-210ENST00000462125 RGS20O76081 388 aa15.29■□□□□ 0.04
C9orf3-210ENST00000462125 HOXA13P31271 388 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-210ENST00000462125 ARHGAP1Q07960 439 aa15.29■□□□□ 0.04
C9orf3-210ENST00000462125 LY6KQ17RY6 165 aa15.29■□□□□ 0.04
C9orf3-210ENST00000462125 FAM109BQ6ICB4 259 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-210ENST00000462125 FANCBQ8NB91 859 aa15.29■□□□□ 0.04
C9orf3-210ENST00000462125 EMID1Q96A84 441 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-210ENST00000462125 RRP36Q96EU6 259 aaKnown RBP15.29■□□□□ 0.04
C9orf3-210ENST00000462125 ALDH8A1Q9H2A2 487 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-210ENST00000462125 SLC12A7Q9Y666 1083 aa15.29■□□□□ 0.04
C9orf3-210ENST00000462125 BAZ2BQ9UIF8 2168 aaKnown RBP15.29■□□□□ 0.04
C9orf3-210ENST00000462125 MYH6P13533 1939 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 B4GALT4O60513 344 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 PLEKHA8P1O95397 391 aa15.28■□□□□ 0.04
C9orf3-210ENST00000462125 GH1P01241 217 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms