RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 RNF181Q9P0P0 153 aa10.48□□□□□ -0.73
NUDCD3-203ENST00000460110 CLEC11AQ9Y240 323 aa10.48□□□□□ -0.73
NUDCD3-203ENST00000460110 POTEFA5A3E0 1075 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 GCOM1H8Y6P7 765 aaPredicted RBP10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 OFD1O75665 1012 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 TPM2P07951 284 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 POLR2MP0CAP2 368 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 POTEIP0CG38 1075 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 PTPN14Q15678 1187 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 POTEGQ6S5H5 508 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 POTEEQ6S8J3 1075 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 LARP4BQ92615 738 aaKnown RBP10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 MTRQ99707 1265 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 NID2Q14112 1375 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 IGKV6D-41A0A0C4DH26 115 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 NPHP3-ACAD11A0A0J9YXS1 232 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 IKBKBO14920 756 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 HMGCS2P54868 508 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 TATDN1Q6P1N9 297 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 IGSF22Q8N9C0 903 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 KIAA1524Q8TCG1 905 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 PIGOQ8TEQ8 1089 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 CCDC88AQ3V6T2 1871 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 USP27XA6NNY8 438 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 EIF2AK2P19525 551 aaKnown RBP10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 GSDMDP57764 484 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 SPATA1Q5VX52 437 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 LDHDQ86WU2 507 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 C4orf32Q8N8J7 132 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 DESI2Q9BSY9 194 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 PDCL3Q9H2J4 239 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 RGL1Q9NZL6 768 aa10.47□□□□□ -0.73
NUDCD3-203ENST00000460110 STK4Q13043 487 aa10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 CTTNQ14247 550 aaKnown RBP10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 GPBP1Q86WP2 473 aa10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 VCPKMTQ9H867 229 aa10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 MMRN2Q9H8L6 949 aa10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 V9GYY5 206 aaPredicted RBP10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 NT5C2P49902 561 aa10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 PDXDC2PQ6P474 469 aa10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 ENOX1Q8TC92 643 aaKnown RBP10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 MRIQ9BWK5 157 aa10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 FHDC1Q9C0D6 1143 aaPredicted RBP10.46□□□□□ -0.73
NUDCD3-203ENST00000460110 TESPA1A2RU30 521 aaPredicted RBP10.46□□□□□ -0.74
NUDCD3-203ENST00000460110 ZNF500O60304 480 aaPredicted RBP10.46□□□□□ -0.74
NUDCD3-203ENST00000460110 SNHG28P0DPA3 235 aa10.46□□□□□ -0.74
NUDCD3-203ENST00000460110 TRIML1Q8N9V2 468 aa10.46□□□□□ -0.74
NUDCD3-203ENST00000460110 DAGLBQ8NCG7 672 aa10.46□□□□□ -0.74
NUDCD3-203ENST00000460110 TRAF5O00463 557 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 LAD1O00515 517 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 GAS7O60861 476 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 MKRN3Q13064 507 aaKnown RBP10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 GPR162Q16538 588 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 NAALADL2Q58DX5 795 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 SARM1Q6SZW1 724 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 KCNK18Q7Z418 384 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 TRPM4Q8TD43 1214 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 DDX12PQ92771 950 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 GMLQ99445 158 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 ABCB11O95342 1321 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 KCNJ18B7U540 433 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 PEX10O60683 326 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 FKBP1AP62942 108 aaKnown RBP10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 KCNJ12Q14500 433 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 CCDC40Q4G0X9 1142 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 GRIPAP1Q4V328 841 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 ZNF658Q5TYW1 1059 aaPredicted RBP10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 TCERG1LQ5VWI1 586 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 ERMNQ8TAM6 284 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 SPON1Q9HCB6 807 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 TMX2Q9Y320 296 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 MYMKA6NI61 221 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 TRIM21P19474 475 aaKnown RBP10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 ARMCX5Q6P1M9 558 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 AK8Q96MA6 479 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 PAGR1Q9BTK6 254 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 TRIM9Q9C026 710 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 MRPL11Q9Y3B7 192 aaKnown RBP10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 DOCK2Q92608 1830 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 COL24A1Q17RW2 1714 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 ARAP2Q8WZ64 1704 aa10.45□□□□□ -0.74
NUDCD3-203ENST00000460110 ZNF541Q9H0D2 1346 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 PPP1R3GB7ZBB8 358 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 hCG_1984214I3L0E3 225 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 E2F4Q16254 413 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 LRCH2Q5VUJ6 765 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 SPECC1LQ69YQ0 1117 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 ZNF713Q8N859 430 aaPredicted RBP10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 CCDC150Q8NCX0 1101 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 RPAP3Q9H6T3 665 aaPredicted RBP10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 LZTFL1Q9NQ48 299 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 DNM3Q9UQ16 869 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 ESYT2A0FGR8 921 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 NFIBO00712 420 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 MEIS2O14770 477 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 SMARCA1P28370 1054 aa10.44□□□□□ -0.74
NUDCD3-203ENST00000460110 ERCC5P28715 1186 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms