RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PCDH19Q8TAB3 1148 aa7.63□□□□□ -1.19
CCDC50-203ENST00000460064 ADAMTS10Q9H324 1103 aa7.63□□□□□ -1.19
CCDC50-203ENST00000460064 BTG4Q9NY30 223 aa7.63□□□□□ -1.19
CCDC50-203ENST00000460064 ARVCFO00192 962 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 NPTXRO95502 500 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 SOD2P04179 222 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 CPEP16870 476 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 POU3F3P20264 500 aaPredicted RBP7.62□□□□□ -1.19
CCDC50-203ENST00000460064 CDK11BP21127 795 aaKnown RBP7.62□□□□□ -1.19
CCDC50-203ENST00000460064 BCL6P41182 706 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 GTF2A2P52657 109 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 EVA1CP58658 441 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 DUSP4Q13115 394 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 ANGEL2Q5VTE6 544 aaKnown RBP7.62□□□□□ -1.19
CCDC50-203ENST00000460064 WWC2Q6AWC2 1192 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 PKN3Q6P5Z2 889 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 ABHD17CQ6PCB6 329 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 SPRED2Q7Z698 418 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 STRA8Q7Z7C7 330 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 ATL2Q8NHH9 583 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 MAP6Q96JE9 813 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 SLAMF8Q9P0V8 285 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 MCM8Q9UJA3 840 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 COQ6Q9Y2Z9 468 aa7.62□□□□□ -1.19
CCDC50-203ENST00000460064 FADS2P1A8MWK0 482 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 FAM47E-STBD1D6RA91 191 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 RAB11FIP3O75154 756 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 ST5P78524 1137 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 STRN3Q13033 797 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 RALGPS1Q5JS13 557 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 CEP68Q76N32 757 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 IGSF22Q8N9C0 903 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 PRPF38AQ8NAV1 312 aaKnown RBP7.61□□□□□ -1.19
CCDC50-203ENST00000460064 LINC01599Q8WXQ3 324 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 HHIPL1Q96JK4 782 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 ALPK1Q96QP1 1244 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 IPPKQ9H8X2 491 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 CLDND1Q9NY35 253 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 PPARGC1AQ9UBK2 798 aaKnown RBP7.61□□□□□ -1.19
CCDC50-203ENST00000460064 EBF1Q9UH73 591 aa7.61□□□□□ -1.19
CCDC50-203ENST00000460064 A0A1W2PQ27 194 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 A0A1W2PQ64 194 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 A0A1W2PQC6 194 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 A0A1W2PQD8 194 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 GSTA4O15217 222 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 MED26O95402 600 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 DNM2P50570 870 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 SCNN1BP51168 640 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 ZNF574Q6ZN55 896 aaPredicted RBP7.6□□□□□ -1.19
CCDC50-203ENST00000460064 AFAP1L2Q8N4X5 818 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 DPF3Q92784 378 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 FBXW5Q969U6 566 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 TMEM169Q96HH4 297 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 JMJD8Q96S16 334 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 KCNJ15Q99712 375 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 G6PC3Q9BUM1 346 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 HOMER2Q9NSB8 354 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 DDX56Q9NY93 547 aaKnown RBP7.6□□□□□ -1.19
CCDC50-203ENST00000460064 GULP1Q9UBP9 304 aa7.6□□□□□ -1.19
CCDC50-203ENST00000460064 A0A1W2PQ45 241 aaPredicted RBP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 A0A1W2PQY0 241 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 WTIPA6NIX2 430 aaPredicted RBP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 M0R2C6 588 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 PPP1R11O60927 126 aaPredicted RBP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 GLRX3O76003 335 aaKnown RBP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 CKMP06732 381 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 ZGLP1P0C6A0 271 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 GRK2P25098 689 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 SSTR4P31391 388 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 GRK3P35626 688 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 KIR2DL1P43626 348 aaPredicted RBP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 KIR2DL2P43627 348 aaPredicted RBP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 CEBPAP49715 358 aaPredicted RBP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 CDKN1CP49918 316 aaPredicted RBP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 RTP1P59025 263 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 SART3Q15020 963 aaKnown RBP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 SLC14A2Q15849 920 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 SEPT7Q16181 437 aaKnown RBP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 FAM47CQ5HY64 1035 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 CEP128Q6ZU80 1094 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 USP33Q8TEY7 942 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 TRMT2BQ96GJ1 504 aaKnown RBP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 JAM3Q9BX67 310 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC50-203ENST00000460064 PRDM7Q9NQW5 492 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 CATSPERZQ9NTU4 200 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 MARCH2Q9P0N8 246 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 CCDC39Q9UFE4 941 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 FBXL7Q9UJT9 491 aa7.59□□□□□ -1.19
CCDC50-203ENST00000460064 CCDC66A2RUB6 948 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 USP2O75604 605 aaPredicted RBP7.58□□□□□ -1.2
CCDC50-203ENST00000460064 FUCA1P04066 466 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 PRNPP04156 253 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 PYGMP11217 842 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 HK2P52789 917 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 DHCR24Q15392 516 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 C16orf59Q7L2K0 433 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 SLCO6A1Q86UG4 719 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 ANKLE2Q86XL3 938 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 SPPL2CQ8IUH8 684 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms