RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ACRBPQ8NEB7 543 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 RASGRP4Q8TDF6 673 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 SYN2Q92777 582 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-202ENST00000459727 EXOC4Q96A65 974 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 CCDC42Q96M95 316 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 CEP63Q96MT8 703 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 MTMR9Q96QG7 549 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 SLF1Q9BQI6 1058 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 FUT8Q9BYC5 575 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 MTMR4Q9NYA4 1195 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 RNF14Q9UBS8 474 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 SAP30BPQ9UHR5 308 aaKnown RBP9.85□□□□□ -0.83
HDAC3-202ENST00000459727 USP21Q9UK80 565 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 SYNPO2Q9UMS6 1093 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 SAR1BQ9Y6B6 198 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 IGKV6D-41A0A0C4DH26 115 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 SSU72P8A0A1W2PR75 194 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 KLRG2A4D1S0 409 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-202ENST00000459727 B4DLN1 442 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 CLSTN1O94985 981 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 OAS2P29728 719 aaKnown RBP9.84□□□□□ -0.83
HDAC3-202ENST00000459727 GABPAQ06546 454 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 AP3B2Q13367 1082 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 TMEM119Q4V9L6 283 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 VWA3BQ502W6 1294 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 HYIQ5T013 277 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 FAM196AQ6ZSG2 479 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 CCDC65Q8IXS2 484 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 SLFN12Q8IYM2 578 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 SLC44A5Q8NCS7 719 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 TBC1D16Q8TBP0 767 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 RAD54LQ92698 747 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 PURBQ96QR8 312 aaKnown RBP9.84□□□□□ -0.83
HDAC3-202ENST00000459727 DUSP9Q99956 384 aaKnown RBP9.84□□□□□ -0.83
HDAC3-202ENST00000459727 CWC15Q9P013 229 aaKnown RBP9.84□□□□□ -0.83
HDAC3-202ENST00000459727 SERPINB13Q9UIV8 391 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 PLAGL2Q9UPG8 496 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 JRKLQ9Y4A0 524 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 FOCADQ5VW36 1801 aa9.84□□□□□ -0.83
HDAC3-202ENST00000459727 TAF1P21675 1872 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 TRIM49BA6NDI0 452 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 MARCH6O60337 910 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 NPM3O75607 178 aaKnown RBP9.83□□□□□ -0.84
HDAC3-202ENST00000459727 LCA5LO95447 670 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 SERPINB2P05120 415 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 TCP1P17987 556 aaKnown RBP9.83□□□□□ -0.84
HDAC3-202ENST00000459727 ANXA13P27216 316 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 TECP42680 631 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 USP11P51784 963 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 FKBP1AP62942 108 aaKnown RBP9.83□□□□□ -0.84
HDAC3-202ENST00000459727 FKBP3Q00688 224 aaKnown RBP9.83□□□□□ -0.84
HDAC3-202ENST00000459727 ZNF543Q08ER8 600 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 PTPN21Q16825 1174 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 SLC35G1Q2M3R5 365 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 BEND6Q5SZJ8 279 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-202ENST00000459727 HAUS3Q68CZ6 603 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 ANKRD40Q6AI12 368 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 USP17L2Q6R6M4 530 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 HHIPL2Q6UWX4 724 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 ZNF572Q7Z3I7 529 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-202ENST00000459727 FMNL3Q8IVF7 1028 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 MYOCDQ8IZQ8 938 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 RNF10Q8N5U6 811 aaKnown RBP9.83□□□□□ -0.84
HDAC3-202ENST00000459727 ERMNQ8TAM6 284 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 FAM71BQ8TC56 605 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 SNX29Q8TEQ0 813 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 DCAF4Q8WV16 495 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 SECISBP2LQ93073 1101 aaKnown RBP9.83□□□□□ -0.84
HDAC3-202ENST00000459727 PIGSQ96S52 555 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 MRIQ9BWK5 157 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 TSPYL1Q9H0U9 437 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 DHX36Q9H2U1 1008 aaKnown RBP9.83□□□□□ -0.84
HDAC3-202ENST00000459727 NDST4Q9H3R1 872 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 DEF6Q9H4E7 631 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 ANKZF1Q9H8Y5 726 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 NHEJ1Q9H9Q4 299 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-202ENST00000459727 PUF60Q9UHX1 559 aaKnown RBP9.83□□□□□ -0.84
HDAC3-202ENST00000459727 FAM184BQ9ULE4 1060 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 GUCA1BQ9UMX6 200 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 MAPK8IP1Q9UQF2 711 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 DAGLAQ9Y4D2 1042 aa9.83□□□□□ -0.84
HDAC3-202ENST00000459727 ATP8B3O60423 1300 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 PITPNM2Q9BZ72 1349 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.82□□□□□ -0.84
HDAC3-202ENST00000459727 PP2D1A8MPX8 630 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 PPEF1O14829 653 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-202ENST00000459727 ZBTB5O15062 677 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 TBX3O15119 743 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 VEGFAP15692 232 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-202ENST00000459727 TXKP42681 527 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 CLK2P49760 499 aaKnown RBP9.82□□□□□ -0.84
HDAC3-202ENST00000459727 PMS1P54277 932 aaKnown RBP9.82□□□□□ -0.84
HDAC3-202ENST00000459727 HDLBPQ00341 1268 aaKnown RBP9.82□□□□□ -0.84
HDAC3-202ENST00000459727 EVX2Q03828 476 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 GRB10Q13322 594 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 NEK11Q8NG66 645 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 CAGE1Q8TC20 777 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 DDX25Q9UHL0 483 aaKnown RBP9.82□□□□□ -0.84
HDAC3-202ENST00000459727 L1RE1Q9UN81 338 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms