RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PTPRFP10586 1907 aa6.6□□□□□ -1.35
RNU1-88P-201ENST00000459274 RBBP6Q7Z6E9 1792 aaKnown RBP6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 KDM3AQ9Y4C1 1321 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 ZNFX1Q9P2E3 1918 aaKnown RBP6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 CCL15-CCL14A0A0B4J2E2 113 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 A0A0G2JLL6 359 aaPredicted RBP6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 TRAF5O00463 557 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 ATP2A1O14983 1001 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 TBX3O15119 743 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 MAFGO15525 162 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 SLC26A4O43511 780 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 DKC1O60832 514 aaKnown RBP eCLIP6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 STAM2O75886 525 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 TOMM70O94826 608 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 ZNF202O95125 648 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 ALDH1A1P00352 501 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 FCER1AP12319 257 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 MYCLP12524 364 aaPredicted RBP6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 PTPREP23469 700 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 CCND2P30279 289 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 HOXA13P31271 388 aaPredicted RBP6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 STAT6P42226 847 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 JAG1P78504 1218 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 ARHGAP4P98171 946 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 ATP2C1P98194 919 aaPredicted RBP6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 PDIA5Q14554 519 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 CCL15Q16663 113 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 UBE2SQ16763 222 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 SHROOM1Q2M3G4 852 aaPredicted RBP6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 PRR16Q569H4 304 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 LDLRAD1Q5T700 205 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 RRAGBQ5VZM2 374 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 RGMBQ6NW40 437 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 USP17L6PQ6QN14 398 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 PRRT2Q7Z6L0 340 aaPredicted RBP6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 GPRC5AQ8NFJ5 357 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 RASGRP4Q8TDF6 673 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 ATG4CQ96DT6 458 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 AGBL1Q96MI9 1066 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 FAM20AQ96MK3 541 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 TIGD1Q96MW7 591 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 WDR11Q9BZH6 1224 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 CUEDC2Q9H467 287 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 TSPY26PQ9H489 355 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 RNF146Q9NTX7 359 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 FBXO28Q9NVF7 368 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 DACT1Q9NYF0 836 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 FZD1Q9UP38 647 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 KCNH4Q9UQ05 1017 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 SAMM50Q9Y512 469 aa6.59□□□□□ -1.35
RNU1-88P-201ENST00000459274 OTOFQ9HC10 1997 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 LOXHD1Q8IVV2 1947 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 A0A1B0GVL5 298 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 TMEM88BA6NKF7 163 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 BECN2A8MW95 431 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 POTECB2RU33 542 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 GOLGA6L19H0YKK7 550 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 PDHXO00330 501 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 STRNO43815 780 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 TECP42680 631 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 HERVK_113P62684 666 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 PDE4DQ08499 809 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 FSTL1Q12841 308 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 STIM1Q13586 685 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 KIF22Q14807 665 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 ARHGEF6Q15052 776 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 STXBP2Q15833 593 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 CAMK4Q16566 473 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 KCNV1Q6PIU1 500 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 ANKRD23Q86SG2 305 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 PLA2G4DQ86XP0 818 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 KCTD17Q8N5Z5 321 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 GIMAP8Q8ND71 665 aaPredicted RBP6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 DNERQ8NFT8 737 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 WNK4Q96J92 1243 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 CLMNQ96JQ2 1002 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 IWS1Q96ST2 819 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 RMDN3Q96TC7 470 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 ASCC2Q9H1I8 757 aaPredicted RBP6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 TTC12Q9H892 705 aaPredicted RBP6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 MAGEF1Q9HAY2 307 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 RMND1Q9NWS8 449 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 TMEM260Q9NX78 707 aa6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 MORC2Q9Y6X9 1032 aaPredicted RBP6.58□□□□□ -1.36
RNU1-88P-201ENST00000459274 PARP14Q460N5 1801 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 MYH9P35579 1960 aaKnown RBP6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 SYCE3A1L190 88 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 TESPA1A2RU30 521 aaPredicted RBP6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 ASB14A6NK59 587 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 GOLGA6L6A8MZA4 724 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 MEIS2O14770 477 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 POLR2DO15514 142 aaKnown RBP6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 GAS7O60861 476 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 GADD45BO75293 160 aaPredicted RBP6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 KIF20AO95235 890 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 KRT18P05783 430 aaKnown RBP6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 MYL1P05976 194 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 CYP3A4P08684 503 aa6.57□□□□□ -1.36
RNU1-88P-201ENST00000459274 PFKFB1P16118 471 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms