RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 CYFIP2Q96F07 1278 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 IL17RAQ96F46 866 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 SEC16BQ96JE7 1060 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 LRRC37BQ96QE4 947 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 DBNDD2Q9BQY9 259 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 METTL22Q9BUU2 404 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 CARD10Q9BWT7 1032 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 NLRC4Q9NPP4 1024 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 SAMSN1Q9NSI8 373 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 GYG2O15488 501 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ESRRBO95718 433 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 XRCC5P13010 732 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 MAGOHP61326 146 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ZNF827Q17R98 1081 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 THEMISQ8N1K5 641 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 U2AF1L4Q8WU68 220 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 TEKT4Q8WW24 435 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 RNF26Q9BY78 433 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ZFATQ9P243 1243 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 TRMT112Q9UI30 125 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 V9GY48 417 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 MED14O60244 1454 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 AATKQ6ZMQ8 1374 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 MED23Q9ULK4 1368 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 CDHR2Q9BYE9 1310 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 MAGEA13PA6NCF6 341 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 MIF4GDA9UHW6 222 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 PRPF6O94906 941 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 LARGE1O95461 756 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ECEL1O95672 775 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 HSPD1P10809 573 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 HMGB2P26583 209 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 AARSP49588 968 aaKnown RBP eCLIP5.44□□□□□ -1.543e-6■■■■■ 61.8
PCDH9-203ENST00000456367 DR1Q01658 176 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 DDR1Q08345 913 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 GOLGA8FQ08AF8 430 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 GOLGA8DPQ0D2H9 430 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ESCO1Q5FWF5 840 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 DAB2IPQ5VWQ8 1189 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 NAIF1Q69YI7 327 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 TRIML2Q8N7C3 387 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 SPATA4Q8NEY3 305 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ZC3H15Q8WU90 426 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 DNAJC9Q8WXX5 260 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 FAM167BQ9BTA0 163 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 FAM129AQ9BZQ8 928 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 BLZF1Q9H2G9 400 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ETNK1Q9HBU6 452 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 PAPOLBQ9NRJ5 636 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ARMCX3Q9UH62 379 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 SNX12Q9UMY4 172 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ARHGEF5Q12774 1597 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 KDRP35968 1356 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ACEP12821 1306 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 LRRIQ3A6PVS8 624 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 MOCS3O95396 460 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 FMNL1O95466 1100 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ANXA13P27216 316 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 EIF4A3P38919 411 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 SNX1Q13596 522 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 IDI1Q13907 227 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 SLC44A4Q53GD3 710 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 PRR16Q569H4 304 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 AKNAD1Q5T1N1 836 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 CENPUQ71F23 418 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 PALM2Q8IXS6 379 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 NSMCE1Q8WV22 266 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 SYMPKQ92797 1274 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 PHKBQ93100 1093 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 HIC2Q96JB3 615 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 CLIC6Q96NY7 704 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 MAK16Q9BXY0 300 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 TRIM55Q9BYV6 548 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 MRPL40Q9NQ50 206 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 NDE1Q9NXR1 346 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 RGL1Q9NZL6 768 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 SENP1Q9P0U3 644 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 TRPC6Q9Y210 931 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 USP15Q9Y4E8 981 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 CEP170Q5SW79 1584 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 A0A1B0GTH6 734 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 B4DLN1 442 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 EXOC5O00471 708 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 AHCYL1O43865 530 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 TMCC1O94876 653 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 PTPREP23469 700 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 HSPA9P38646 679 aaKnown RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 SERPINB4P48594 390 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 PLTPP55058 493 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 CDR2Q01850 454 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 POLA2Q14181 598 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ARL6IP4Q66PJ3 421 aaKnown RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 TRPM8Q7Z2W7 1104 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 TACC3Q9Y6A5 838 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 STK36Q9NRP7 1315 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ATP5J2-PTCD1G3V325 749 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 NVLO15381 856 aaKnown RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 PTCD1O75127 700 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms