RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 GPSM2P81274 684 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 PRKG1Q13976 671 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 TPH2Q8IWU9 490 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 PSTPIP2Q9H939 334 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 JRKLQ9Y4A0 524 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 NDUFA10O95299 355 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 FTCDO95954 541 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 PLEKP08567 350 aaPredicted RBP12.39□□□□□ -0.43
DDR1-240ENST00000454612 HPDP32754 393 aaPredicted RBP12.39□□□□□ -0.43
DDR1-240ENST00000454612 ATP1A2P50993 1020 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 GPBP1Q86WP2 473 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 FAM114A1Q8IWE2 563 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 SLF2Q8IX21 1173 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 FBXL16Q8N461 479 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 ALS2CR12Q96Q35 445 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 CD209Q9NNX6 404 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 TLDC2A0PJX2 215 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 E9PMD0 336 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 N4BP1O75113 896 aaKnown RBP12.39□□□□□ -0.43
DDR1-240ENST00000454612 TBCAO75347 108 aaKnown RBP12.39□□□□□ -0.43
DDR1-240ENST00000454612 GYPCP04921 128 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 IVLP07476 585 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 ARHGAP44Q17R89 818 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 ZNF658Q5TYW1 1059 aaPredicted RBP12.39□□□□□ -0.43
DDR1-240ENST00000454612 GPR161Q8N6U8 529 aaKnown RBP12.39□□□□□ -0.43
DDR1-240ENST00000454612 TRIML1Q8N9V2 468 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 UHMK1Q8TAS1 419 aaKnown RBP12.39□□□□□ -0.43
DDR1-240ENST00000454612 PARP3Q9Y6F1 533 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 WNK3Q9BYP7 1800 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 GJC1P36383 396 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 KRT25Q7Z3Z0 450 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 NOA1Q8NC60 698 aaKnown RBP12.38□□□□□ -0.43
DDR1-240ENST00000454612 BRIP1Q9BX63 1249 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 XDHP47989 1333 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 ESYT3A0FGR9 886 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 BICDL2A1A5D9 508 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 USP17L10C9JJH3 530 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 H7C1D1 291 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 AKR1B1P15121 316 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 APBA1Q02410 837 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 SEC23AQ15436 765 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 HDXQ7Z353 690 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 SRGAP1Q7Z6B7 1085 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 CCDC84Q86UT8 332 aaPredicted RBP12.38□□□□□ -0.43
DDR1-240ENST00000454612 KIFC2Q96AC6 838 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 LSM14BQ9BX40 385 aaKnown RBP12.38□□□□□ -0.43
DDR1-240ENST00000454612 GOLPH3Q9H4A6 298 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 ABHD10Q9NUJ1 306 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.38□□□□□ -0.43
DDR1-240ENST00000454612 NUP188Q5SRE5 1749 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 MYO1CO00159 1063 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 TRIM66O15016 1216 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 MRPL12P52815 198 aaKnown RBP12.38□□□□□ -0.43
DDR1-240ENST00000454612 EHHADHQ08426 723 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 ANKRD40Q6AI12 368 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 MIGA2Q7L4E1 593 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 EFCC1Q9HA90 598 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDR1-240ENST00000454612 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
DDR1-240ENST00000454612 RNF225M0QZC1 329 aaPredicted RBP12.37□□□□□ -0.43
DDR1-240ENST00000454612 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
DDR1-240ENST00000454612 NR1I3Q14994 352 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 RNF187Q5TA31 235 aaPredicted RBP12.37□□□□□ -0.43
DDR1-240ENST00000454612 ICE2Q659A1 982 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 CNNM4Q6P4Q7 775 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 RBM17Q96I25 401 aaKnown RBP12.37□□□□□ -0.43
DDR1-240ENST00000454612 GBP3Q9H0R5 595 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 ADD3Q9UEY8 706 aaKnown RBP12.37□□□□□ -0.43
DDR1-240ENST00000454612 HYOU1Q9Y4L1 999 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 GCNT3O95395 438 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 LONP1P36776 959 aaKnown RBP12.37□□□□□ -0.43
DDR1-240ENST00000454612 EIF4A3P38919 411 aaKnown RBP12.37□□□□□ -0.43
DDR1-240ENST00000454612 PPP2R5BQ15173 497 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 CUL5Q93034 780 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 P2RX5Q93086 422 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 ZNF446Q9NWS9 450 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 TMOD2Q9NZR1 351 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 DDX25Q9UHL0 483 aaKnown RBP12.37□□□□□ -0.43
DDR1-240ENST00000454612 TADA3O75528 432 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 ATP2C1P98194 919 aaPredicted RBP12.37□□□□□ -0.43
DDR1-240ENST00000454612 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 PIGOQ8TEQ8 1089 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 NHEJ1Q9H9Q4 299 aaPredicted RBP12.37□□□□□ -0.43
DDR1-240ENST00000454612 PCDHA6Q9UN73 950 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 PCDHA8Q9Y5H6 950 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
DDR1-240ENST00000454612 ATP1A1P05023 1023 aaKnown RBP12.36□□□□□ -0.43
DDR1-240ENST00000454612 CYP2J2P51589 502 aa12.36□□□□□ -0.43
DDR1-240ENST00000454612 MB21D1Q8N884 522 aa12.36□□□□□ -0.43
DDR1-240ENST00000454612 CTNNBL1Q8WYA6 563 aaPredicted RBP12.36□□□□□ -0.43
DDR1-240ENST00000454612 ADAMTS1Q9UHI8 967 aa12.36□□□□□ -0.43
DDR1-240ENST00000454612 NARFQ9UHQ1 456 aa12.36□□□□□ -0.43
DDR1-240ENST00000454612 PNPLA7Q6ZV29 1317 aa12.36□□□□□ -0.43
DDR1-240ENST00000454612 VSNL1P62760 191 aa12.36□□□□□ -0.43
DDR1-240ENST00000454612 EN1Q05925 392 aaPredicted RBP12.36□□□□□ -0.43
DDR1-240ENST00000454612 CC2D1AQ6P1N0 951 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms