RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 KRT32Q14532 448 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 FSCN1Q16658 493 aaKnown RBP16.89■□□□□ 0.29
HSPG2-207ENST00000453796 NFXL1Q6ZNB6 911 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 NOL8Q76FK4 1167 aaKnown RBP16.89■□□□□ 0.29
HSPG2-207ENST00000453796 DHX32Q7L7V1 743 aaKnown RBP16.89■□□□□ 0.29
HSPG2-207ENST00000453796 ANKRD33Q7Z3H0 272 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 SH3RF1Q7Z6J0 888 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 SRBD1Q8N5C6 995 aaKnown RBP16.89■□□□□ 0.29
HSPG2-207ENST00000453796 NSUN6Q8TEA1 469 aaKnown RBP16.89■□□□□ 0.29
HSPG2-207ENST00000453796 GLT1D1Q96MS3 346 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 IWS1Q96ST2 819 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 PXMP2Q9NR77 195 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 SCN10AQ9Y5Y9 1956 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 SZT2Q5T011 3432 aa16.88■□□□□ 0.29
HSPG2-207ENST00000453796 TRIM43BA6NCK2 446 aa16.88■□□□□ 0.29
HSPG2-207ENST00000453796 GNAQP50148 359 aa16.88■□□□□ 0.29
HSPG2-207ENST00000453796 SCFD2Q8WU76 684 aa16.88■□□□□ 0.29
HSPG2-207ENST00000453796 TRIM43Q96BQ3 446 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-207ENST00000453796 TCEANC2Q96MN5 208 aa16.88■□□□□ 0.29
HSPG2-207ENST00000453796 TOX2Q96NM4 488 aa16.88■□□□□ 0.29
HSPG2-207ENST00000453796 RMDN3Q96TC7 470 aa16.88■□□□□ 0.29
HSPG2-207ENST00000453796 LZTS2Q9BRK4 669 aa16.88■□□□□ 0.29
HSPG2-207ENST00000453796 AP5M1Q9H0R1 490 aa16.88■□□□□ 0.29
HSPG2-207ENST00000453796 NKRFO15226 690 aaKnown RBP eCLIP16.87■□□□□ 0.29
HSPG2-207ENST00000453796 ARIH2O95376 493 aa16.87■□□□□ 0.29
HSPG2-207ENST00000453796 CENPBP07199 599 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-207ENST00000453796 MDM2Q00987 491 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-207ENST00000453796 FAAP100Q0VG06 881 aa16.87■□□□□ 0.29
HSPG2-207ENST00000453796 CCDC62Q6P9F0 684 aa16.87■□□□□ 0.29
HSPG2-207ENST00000453796 APOA5Q6Q788 366 aa16.87■□□□□ 0.29
HSPG2-207ENST00000453796 RAB11FIP4Q86YS3 637 aa16.87■□□□□ 0.29
HSPG2-207ENST00000453796 FANCBQ8NB91 859 aa16.87■□□□□ 0.29
HSPG2-207ENST00000453796 SLC43A3Q8NBI5 491 aa16.87■□□□□ 0.29
HSPG2-207ENST00000453796 SNX14Q9Y5W7 946 aa16.87■□□□□ 0.29
HSPG2-207ENST00000453796 SLC12A7Q9Y666 1083 aa16.87■□□□□ 0.29
HSPG2-207ENST00000453796 A0A0U1RQG5 324 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-207ENST00000453796 ARVCFO00192 962 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 EPB41L2O43491 1005 aaKnown RBP16.86■□□□□ 0.29
HSPG2-207ENST00000453796 NR3C2P08235 984 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 CLTBP09497 229 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 EIF2AK2P19525 551 aaKnown RBP16.86■□□□□ 0.29
HSPG2-207ENST00000453796 HOXA13P31271 388 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-207ENST00000453796 PPP2R5BQ15173 497 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 STXBP2Q15833 593 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 ARHGEF16Q5VV41 709 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 CXCL17Q6UXB2 119 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 TMTC3Q6ZXV5 915 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 CMTR1Q8N1G2 835 aaKnown RBP16.86■□□□□ 0.29
HSPG2-207ENST00000453796 PIBF1Q8WXW3 757 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 COPS5Q92905 334 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 RRP36Q96EU6 259 aaKnown RBP16.86■□□□□ 0.29
HSPG2-207ENST00000453796 PDCD2LQ9BRP1 358 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 PRKAG2Q9UGJ0 569 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 BRPF3Q9ULD4 1205 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 GRIN2DO15399 1336 aa16.86■□□□□ 0.29
HSPG2-207ENST00000453796 KIAA0355O15063 1070 aa16.85■□□□□ 0.29
HSPG2-207ENST00000453796 PQBP1O60828 265 aaKnown RBP16.85■□□□□ 0.29
HSPG2-207ENST00000453796 CABYRO75952 493 aa16.85■□□□□ 0.29
HSPG2-207ENST00000453796 REC8O95072 547 aa16.85■□□□□ 0.29
HSPG2-207ENST00000453796 HMGB1P09429 215 aaKnown RBP16.85■□□□□ 0.29
HSPG2-207ENST00000453796 TXNP10599 105 aaKnown RBP16.85■□□□□ 0.29
HSPG2-207ENST00000453796 ITGB8P26012 769 aa16.85■□□□□ 0.29
HSPG2-207ENST00000453796 TTLL4Q14679 1199 aa16.85■□□□□ 0.29
HSPG2-207ENST00000453796 MICU3Q86XE3 530 aa16.85■□□□□ 0.29
HSPG2-207ENST00000453796 OR6J1Q8NGC5 347 aa16.85■□□□□ 0.29
HSPG2-207ENST00000453796 UBE2OQ9C0C9 1292 aaKnown RBP16.85■□□□□ 0.29
HSPG2-207ENST00000453796 PRDM5Q9NQX1 630 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-207ENST00000453796 FRMPD4Q14CM0 1322 aa16.85■□□□□ 0.29
HSPG2-207ENST00000453796 MROH7Q68CQ1 1323 aa16.85■□□□□ 0.29
HSPG2-207ENST00000453796 GCOM1H8Y6P7 765 aaPredicted RBP16.84■□□□□ 0.29
HSPG2-207ENST00000453796 ZEB2O60315 1214 aa16.84■□□□□ 0.29
HSPG2-207ENST00000453796 RGS20O76081 388 aa16.84■□□□□ 0.29
HSPG2-207ENST00000453796 POLR2MP0CAP2 368 aa16.84■□□□□ 0.29
HSPG2-207ENST00000453796 CPA1P15085 419 aa16.84■□□□□ 0.29
HSPG2-207ENST00000453796 PGM5Q15124 567 aa16.84■□□□□ 0.29
HSPG2-207ENST00000453796 FAM126BQ8IXS8 530 aa16.84■□□□□ 0.29
HSPG2-207ENST00000453796 TDHQ8IZJ6 230 aa16.84■□□□□ 0.29
HSPG2-207ENST00000453796 IL31RAQ8NI17 732 aa16.84■□□□□ 0.29
HSPG2-207ENST00000453796 LBHD1Q9BQE6 289 aaPredicted RBP16.84■□□□□ 0.29
HSPG2-207ENST00000453796 CNTNAP5Q8WYK1 1306 aa16.84■□□□□ 0.29
HSPG2-207ENST00000453796 DOCK5Q9H7D0 1870 aa16.84■□□□□ 0.29
HSPG2-207ENST00000453796 A6NJR5 290 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 DCDC2CA8MYV0 355 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 SOX1O00570 391 aaPredicted RBP16.83■□□□□ 0.28
HSPG2-207ENST00000453796 EIF3JO75822 258 aaKnown RBP16.83■□□□□ 0.28
HSPG2-207ENST00000453796 CD4P01730 458 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 CPT1AP50416 773 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 PURAQ00577 322 aaKnown RBP16.83■□□□□ 0.28
HSPG2-207ENST00000453796 FUT2Q10981 343 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 ITGA7Q13683 1181 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 LY6KQ17RY6 165 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 SEPT14Q6ZU15 432 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 VSIG10LQ86VR7 867 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 FBXL16Q8N461 479 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 BADQ92934 168 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 VTI1AQ96AJ9 217 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 JAKMIP1Q96N16 626 aaKnown RBP16.83■□□□□ 0.28
HSPG2-207ENST00000453796 AGXT2Q9BYV1 514 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 FAM217BQ9NTX9 383 aaPredicted RBP16.83■□□□□ 0.28
HSPG2-207ENST00000453796 POLR3EQ9NVU0 708 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms