RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CDH23Q9H251 3354 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 CD4P01730 458 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 CENPBP07199 599 aaPredicted RBP14.98□□□□□ -0.01
CHD3-206ENST00000452447 MYL3P08590 195 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 PSMC6P62333 389 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 TRAF1Q13077 416 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 PPIGQ13427 754 aaKnown RBP eCLIP14.98□□□□□ -0.012e-6■■□□□ 14.2
CHD3-206ENST00000452447 STXBP2Q15833 593 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 ZNF697Q5TEC3 545 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 ARHGEF16Q5VV41 709 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 FAM109BQ6ICB4 259 aaPredicted RBP14.98□□□□□ -0.01
CHD3-206ENST00000452447 STOX1Q6ZVD7 989 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 HOMER1Q86YM7 354 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 COL20A1Q9P218 1284 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 GRIN2DO15399 1336 aa14.97□□□□□ -0.01
CHD3-206ENST00000452447 SMAD3P84022 425 aaKnown RBP14.97□□□□□ -0.01
CHD3-206ENST00000452447 PURAQ00577 322 aaKnown RBP14.97□□□□□ -0.01
CHD3-206ENST00000452447 CASC1Q6TDU7 716 aa14.97□□□□□ -0.01
CHD3-206ENST00000452447 SEPT14Q6ZU15 432 aa14.97□□□□□ -0.01
CHD3-206ENST00000452447 CENPQQ7L2Z9 268 aaPredicted RBP14.97□□□□□ -0.01
CHD3-206ENST00000452447 MTMR8Q96EF0 704 aa14.97□□□□□ -0.01
CHD3-206ENST00000452447 MTG1Q9BT17 334 aaPredicted RBP14.97□□□□□ -0.01
CHD3-206ENST00000452447 HIPK3Q9H422 1215 aa14.97□□□□□ -0.01
CHD3-206ENST00000452447 MAP3K20Q9NYL2 800 aaKnown RBP14.97□□□□□ -0.01
CHD3-206ENST00000452447 MYH7BA7E2Y1 1941 aa14.96□□□□□ -0.01
CHD3-206ENST00000452447 KPNA6O60684 536 aa14.96□□□□□ -0.01
CHD3-206ENST00000452447 CSF2RAP15509 400 aa14.96□□□□□ -0.01
CHD3-206ENST00000452447 EIF2AK2P19525 551 aaKnown RBP14.96□□□□□ -0.01
CHD3-206ENST00000452447 TROAPQ12815 778 aa14.96□□□□□ -0.01
CHD3-206ENST00000452447 COPS5Q92905 334 aa14.96□□□□□ -0.01
CHD3-206ENST00000452447 FAM161BQ96MY7 647 aa14.96□□□□□ -0.01
CHD3-206ENST00000452447 ESYT1Q9BSJ8 1104 aa14.96□□□□□ -0.01
CHD3-206ENST00000452447 RIOX1Q9H6W3 641 aa14.96□□□□□ -0.01
CHD3-206ENST00000452447 SENP2Q9HC62 589 aa14.96□□□□□ -0.01
CHD3-206ENST00000452447 STXBP5LQ9Y2K9 1186 aa14.96□□□□□ -0.01
CHD3-206ENST00000452447 SCN10AQ9Y5Y9 1956 aa14.96□□□□□ -0.02
CHD3-206ENST00000452447 B4GALT4O60513 344 aa14.95□□□□□ -0.02
CHD3-206ENST00000452447 SUPT20HL2P0C7V6 817 aa14.95□□□□□ -0.02
CHD3-206ENST00000452447 CYP2C18P33260 490 aa14.95□□□□□ -0.02
CHD3-206ENST00000452447 ANTXR2P58335 489 aa14.95□□□□□ -0.02
CHD3-206ENST00000452447 MB21D2Q8IYB1 491 aaPredicted RBP14.95□□□□□ -0.02
CHD3-206ENST00000452447 IGDCC4Q8TDY8 1250 aa14.95□□□□□ -0.02
CHD3-206ENST00000452447 PIGSQ96S52 555 aa14.95□□□□□ -0.02
CHD3-206ENST00000452447 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.95□□□□□ -0.023e-7■■■■■ 27.7
CHD3-206ENST00000452447 LSG1Q9H089 658 aaKnown RBP14.95□□□□□ -0.02
CHD3-206ENST00000452447 TRPV6Q9H1D0 765 aa14.95□□□□□ -0.02
CHD3-206ENST00000452447 ALDH8A1Q9H2A2 487 aaPredicted RBP14.95□□□□□ -0.02
CHD3-206ENST00000452447 PXMP2Q9NR77 195 aa14.95□□□□□ -0.02
CHD3-206ENST00000452447 PNMA6FA0A0J9YX94 578 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 A6NJR5 290 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 PPP1R11O60927 126 aaPredicted RBP14.94□□□□□ -0.02
CHD3-206ENST00000452447 EIF3JO75822 258 aaKnown RBP14.94□□□□□ -0.02
CHD3-206ENST00000452447 ARIH2O95376 493 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 NR3C2P08235 984 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 MCM5P33992 734 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 HSD17B4P51659 736 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 BMP2KLQ5H9B9 411 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 FAM47CQ5HY64 1035 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 CCDC62Q6P9F0 684 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 PSRC1Q6PGN9 363 aaPredicted RBP14.94□□□□□ -0.02
CHD3-206ENST00000452447 SAMD3Q8N6K7 520 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 CTCFLQ8NI51 663 aaPredicted RBP14.94□□□□□ -0.02
CHD3-206ENST00000452447 ANO2Q9NQ90 1003 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.94□□□□□ -0.02
CHD3-206ENST00000452447 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.94□□□□□ -0.02
CHD3-206ENST00000452447 OPLAHO14841 1288 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 PRC1O43663 620 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 CYTH3O43739 400 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 GH1P01241 217 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 HOXA13P31271 388 aaPredicted RBP14.94□□□□□ -0.02
CHD3-206ENST00000452447 KIF5BP33176 963 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 GHRHRQ02643 423 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 LY6KQ17RY6 165 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 NFXL1Q6ZNB6 911 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 TMTC2Q8N394 836 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 SLC17A8Q8NDX2 589 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 MTA3Q9BTC8 594 aa14.94□□□□□ -0.02
CHD3-206ENST00000452447 CCDC69A6NI79 296 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 GCOM1H8Y6P7 765 aaPredicted RBP14.93□□□□□ -0.02
CHD3-206ENST00000452447 SLC27A2O14975 620 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 DDAH1O94760 285 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 POLR2MP0CAP2 368 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 ACRP10323 421 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 MYCLP12524 364 aaPredicted RBP14.93□□□□□ -0.02
CHD3-206ENST00000452447 CCL23P55773 120 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 SLC35G1Q2M3R5 365 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 NBPF20Q3BBV1 942 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 TMEM240Q5SV17 173 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 CREB3L3Q68CJ9 461 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 ZNF365Q70YC5 407 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 C16orf59Q7L2K0 433 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 ZNF654Q8IZM8 581 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 AFG1LQ8WV93 481 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 PIBF1Q8WXW3 757 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 TMEM87BQ96K49 555 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 MAP3K14Q99558 947 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 NOC4LQ9BVI4 516 aaKnown RBP14.93□□□□□ -0.02
CHD3-206ENST00000452447 LY9Q9HBG7 655 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 IL23AQ9NPF7 189 aa14.93□□□□□ -0.02
CHD3-206ENST00000452447 TRMT13Q9NUP7 481 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms