RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 GRB10Q13322 594 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 USP17L6PQ6QN14 398 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 ZDHHC15Q96MV8 337 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 SLC39A2Q9NP94 309 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 EXOC1Q9NV70 894 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 ADGRG1Q9Y653 693 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 ABL1P00519 1130 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 TAL1P17542 331 aaPredicted RBP13.5□□□□□ -0.25
COL27A1-202ENST00000451716 SPAG1Q07617 926 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 DNAJC21Q5F1R6 531 aaKnown RBP13.5□□□□□ -0.25
COL27A1-202ENST00000451716 DACT2Q5SW24 774 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 TTI2Q6NXR4 508 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 ACRBPQ8NEB7 543 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 CALML4Q96GE6 196 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 BLOC1S4Q9NUP1 217 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 OGFRQ9NZT2 677 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 H0YIN7 160 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 CCDC175P0C221 793 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 KCNA4P22459 653 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 ERVK-24P63145 666 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 STIM1Q13586 685 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 SEPT2Q15019 361 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 CERKLQ49MI3 558 aaPredicted RBP13.5□□□□□ -0.25
COL27A1-202ENST00000451716 ANKRD40Q6AI12 368 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 FBXO38Q6PIJ6 1188 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 KCNK18Q7Z418 384 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 CSGALNACT2Q8N6G5 542 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 PNMA5Q96PV4 448 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 DUSP9Q99956 384 aaKnown RBP13.5□□□□□ -0.25
COL27A1-202ENST00000451716 CARD6Q9BX69 1037 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 PSTPIP2Q9H939 334 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 RIC8AQ9NPQ8 531 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 SCN9AQ15858 1988 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 ZBTB5O15062 677 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 ERCC3P19447 782 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 CASQ1P31415 396 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 KRT9P35527 623 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 CNGA4Q8IV77 575 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 FEZ1Q99689 392 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 TDRD3Q9H7E2 651 aaKnown RBP13.5□□□□□ -0.25
COL27A1-202ENST00000451716 ABHD10Q9NUJ1 306 aa13.5□□□□□ -0.25
COL27A1-202ENST00000451716 MYMKA6NI61 221 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 B4DLN1 442 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 TPM1P09493 284 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 SLC1A4P43007 532 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 SETQ01105 290 aaPredicted RBP13.49□□□□□ -0.25
COL27A1-202ENST00000451716 ECM1Q16610 540 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 KIAA0895Q8NCT3 520 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 SNX29Q8TEQ0 813 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 CUL5Q93034 780 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 CDK5RAP3Q96JB5 506 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 ITIH6Q6UXX5 1313 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 hCG_1984214I3L0E3 225 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 MYL1P05976 194 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 KLK7P49862 253 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 QRICH1Q2TAL8 776 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 GPATCH4Q5T3I0 446 aaKnown RBP13.49□□□□□ -0.25
COL27A1-202ENST00000451716 STRIP1Q5VSL9 837 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 ICE2Q659A1 982 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 SIAH1Q8IUQ4 282 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 ZNF713Q8N859 430 aaPredicted RBP13.49□□□□□ -0.25
COL27A1-202ENST00000451716 CHP1Q99653 195 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 C7orf25Q9BPX7 421 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 EPC1Q9H2F5 836 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 CUEDC2Q9H467 287 aa13.49□□□□□ -0.25
COL27A1-202ENST00000451716 DDX25Q9UHL0 483 aaKnown RBP13.49□□□□□ -0.25
COL27A1-202ENST00000451716 NRXN2Q9P2S2 1712 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 TTC26A0AVF1 554 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 MARCH6O60337 910 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 TUBB4AP04350 444 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 IDEP14735 1019 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 JAG1P78504 1218 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 SV2BQ7L1I2 683 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 MB21D1Q8N884 522 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 HAS1Q92839 578 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 P2RX5Q93086 422 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 PI4KBQ9UBF8 816 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 MYH4Q9Y623 1939 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 SLX4Q8IY92 1834 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 TERF2Q15554 542 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 TMEM266Q2M3C6 531 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 GLIS3Q8NEA6 775 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 MNS1Q8NEH6 495 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 KIFC2Q96AC6 838 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 MAGEC2Q9UBF1 373 aaPredicted RBP13.48□□□□□ -0.25
COL27A1-202ENST00000451716 PCDHA1Q9Y5I3 950 aa13.48□□□□□ -0.25
COL27A1-202ENST00000451716 GOLGA6L9A6NEM1 432 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 LGALS16A8MUM7 142 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 CLK2P49760 499 aaKnown RBP13.47□□□□□ -0.25
COL27A1-202ENST00000451716 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.255e-6■□□□□ 8.9
COL27A1-202ENST00000451716 MRPL12P52815 198 aaKnown RBP13.47□□□□□ -0.25
COL27A1-202ENST00000451716 ARHGAP29Q52LW3 1261 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 LARP4BQ92615 738 aaKnown RBP13.47□□□□□ -0.25
COL27A1-202ENST00000451716 SLF1Q9BQI6 1058 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 TUBGCP2Q9BSJ2 902 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 NAA15Q9BXJ9 866 aaKnown RBP13.47□□□□□ -0.25
COL27A1-202ENST00000451716 THAP9Q9H5L6 903 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 AMPD3Q01432 767 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 FLAD1Q8NFF5 587 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms