RNA–Protein interactions for RNA: ENST00000451240.1

AC005550.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC005550.3, Length 3,743 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005550.3-201ENST00000451240 KRT32Q14532 448 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 FOXB2Q5VYV0 432 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 ZCCHC8Q6NZY4 707 aaKnown RBP4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 ERAP2Q6P179 960 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 MPRIPQ6WCQ1 1025 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 CHD1LQ86WJ1 897 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 OR8H2Q8N162 312 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 CRIPAKQ8N1N5 446 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 GRIN3AQ8TCU5 1115 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 MARVELD3Q96A59 401 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 SHDQ96IW2 340 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 C2orf49Q9BVC5 232 aaPredicted RBP4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 MS4A5Q9H3V2 200 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 GEMIN8Q9NWZ8 242 aaKnown RBP4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 PHTF1Q9UMS5 762 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 STRCP1A6NGW2 1772 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 PTPRUQ92729 1446 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 IQCA1LA6NCM1 817 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 EIF3FO00303 357 aaPredicted RBP4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 HNRNPCL1O60812 293 aaKnown RBP4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 STARD3NLO95772 234 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 SOD2P04179 222 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 KPNA1P52294 538 aaPredicted RBP4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 PLIN5Q00G26 463 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 SLC45A4Q5BKX6 768 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 DNAJC21Q5F1R6 531 aaKnown RBP4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 KLHDC7AQ5VTJ3 777 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 CEP135Q66GS9 1140 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 MRM1Q6IN84 353 aaKnown RBP4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 FGD2Q7Z6J4 655 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 CPLX4Q7Z7G2 160 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 PHTF2Q8N3S3 785 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 NINJ1Q92982 152 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 BHMTQ93088 406 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 RADILQ96JH8 1075 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 USP26Q9BXU7 913 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 CDH19Q9H159 772 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 DNAJC25Q9H1X3 360 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 ALDH8A1Q9H2A2 487 aaPredicted RBP4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 PCIF1Q9H4Z3 704 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 LIN7BQ9HAP6 207 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 LGR6Q9HBX8 967 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 CATSPERZQ9NTU4 200 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 TMEM260Q9NX78 707 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 FNIP2Q9P278 1114 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 KIF24Q5T7B8 1368 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 CFAP69A5D8W1 941 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 NEUROD1Q13562 356 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 SLC10A6Q3KNW5 377 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 PPP1R26Q5T8A7 1209 aaPredicted RBP4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 REC114Q7Z4M0 266 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 FTSJ3Q8IY81 847 aaKnown RBP4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 ZNF527Q8NB42 609 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 TRIM52Q96A61 297 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 HSPBAP1Q96EW2 488 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 RUSC1Q9BVN2 902 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 SPATA9Q9BWV2 254 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 TRIM8Q9BZR9 551 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 NLRC4Q9NPP4 1024 aa4.26□□□□□ -1.73
AC005550.3-201ENST00000451240 ESPNB1AK53 854 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 HSP90AB1P08238 724 aaKnown RBP4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 AK2P54819 239 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 PPP2R2AP63151 447 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 GPSM2P81274 684 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 SURF1Q15526 300 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 ISM2Q6H9L7 571 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 SLC22A25Q6T423 547 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 MPP5Q8N3R9 675 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 PJA1Q8NG27 643 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 STAMQ92783 540 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 ZNF622Q969S3 477 aaKnown RBP eCLIP4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 OSBPL3Q9H4L5 887 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 FAM204AQ9H8W3 233 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 ODF2LQ9ULJ1 636 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 RGPD8O14715 1765 aaPredicted RBP4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 NHSL1Q5SYE7 1610 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 DCDC2CA8MYV0 355 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 S1PR4O95977 384 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 PSAPP07602 524 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 PEX2P28328 305 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 SERPINB3P29508 390 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 TNNT3P45378 269 aaPredicted RBP4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 IFIT5Q13325 482 aaKnown RBP4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 PRKG1Q13976 671 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 EFR3AQ14156 821 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 DCAF15Q66K64 600 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 FBXO38Q6PIJ6 1188 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 LSRQ86X29 649 aaPredicted RBP4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 NBPF15Q8N660 670 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 ZBTB34Q8NCN2 500 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 RELTQ969Z4 430 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 HERPUD2Q9BSE4 406 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 IFT22Q9H7X7 185 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 ANLNQ9NQW6 1124 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 TRAK1Q9UPV9 953 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 LTN1O94822 1766 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 RREB1Q92766 1687 aa4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 SETD1BQ9UPS6 1966 aaKnown RBP4.25□□□□□ -1.73
AC005550.3-201ENST00000451240 NKTRP30414 1462 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms