RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 SCFD2Q8WU76 684 aa14.39□□□□□ -0.11
MSH5-209ENST00000450148 AMNQ9BXJ7 453 aa14.39□□□□□ -0.11
MSH5-209ENST00000450148 GPHNQ9NQX3 736 aaPredicted RBP14.39□□□□□ -0.11
MSH5-209ENST00000450148 ZEB2O60315 1214 aa14.38□□□□□ -0.11
MSH5-209ENST00000450148 PPP2R5BQ15173 497 aa14.38□□□□□ -0.11
MSH5-209ENST00000450148 BMP2KLQ5H9B9 411 aa14.38□□□□□ -0.11
MSH5-209ENST00000450148 OR6J1Q8NGC5 347 aa14.38□□□□□ -0.11
MSH5-209ENST00000450148 NSUN6Q8TEA1 469 aaKnown RBP14.38□□□□□ -0.11
MSH5-209ENST00000450148 PIGSQ96S52 555 aa14.38□□□□□ -0.11
MSH5-209ENST00000450148 MPHOSPH6Q99547 160 aaKnown RBP14.38□□□□□ -0.11
MSH5-209ENST00000450148 SEZ6LQ9BYH1 1024 aa14.38□□□□□ -0.11
MSH5-209ENST00000450148 LY9Q9HBG7 655 aa14.38□□□□□ -0.11
MSH5-209ENST00000450148 ERICH2A1L162 156 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 A6NJR5 290 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 B4DLN1 442 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 SLC27A2O14975 620 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 TLR3O15455 904 aaKnown RBP14.37□□□□□ -0.11
MSH5-209ENST00000450148 B4GALT4O60513 344 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 CFBP00751 764 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 TXNP10599 105 aaKnown RBP14.37□□□□□ -0.11
MSH5-209ENST00000450148 MRPL12P52815 198 aaKnown RBP14.37□□□□□ -0.11
MSH5-209ENST00000450148 TMEM67Q5HYA8 995 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 IWS1Q96ST2 819 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 RMDN3Q96TC7 470 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.37□□□□□ -0.119e-11■■□□□ 14.2
MSH5-209ENST00000450148 MTA3Q9BTC8 594 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 PXMP2Q9NR77 195 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 POLR3EQ9NVU0 708 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 PCDHA1Q9Y5I3 950 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 SCN5AQ14524 2016 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 UMODL1Q5DID0 1318 aa14.37□□□□□ -0.11
MSH5-209ENST00000450148 TRIP12Q14669 1992 aaPredicted RBP14.36□□□□□ -0.11
MSH5-209ENST00000450148 GBF1Q92538 1859 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 CSF2RAP15509 400 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 CPT1AP50416 773 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 SMAD3P84022 425 aaKnown RBP14.36□□□□□ -0.11
MSH5-209ENST00000450148 TTLL4Q14679 1199 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 SART3Q15020 963 aaKnown RBP14.36□□□□□ -0.11
MSH5-209ENST00000450148 TMEM240Q5SV17 173 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 RASIP1Q5U651 963 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 CREB3L3Q68CJ9 461 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 HOMER1Q86YM7 354 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 SAMD3Q8N6K7 520 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 VWCEQ96DN2 955 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 GUCD1Q96NT3 240 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 MAP3K14Q99558 947 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 PPP1R12CQ9BZL4 782 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 TRPV6Q9H1D0 765 aa14.36□□□□□ -0.11
MSH5-209ENST00000450148 ALDH8A1Q9H2A2 487 aaPredicted RBP14.36□□□□□ -0.11
MSH5-209ENST00000450148 MAP3K20Q9NYL2 800 aaKnown RBP14.36□□□□□ -0.11
MSH5-209ENST00000450148 PNMA6FA0A0J9YX94 578 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 SH2B2O14492 632 aaPredicted RBP14.35□□□□□ -0.11
MSH5-209ENST00000450148 PRC1O43663 620 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 RGS20O76081 388 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 NR3C2P08235 984 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 MYL3P08590 195 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 EIF2AK2P19525 551 aaKnown RBP14.35□□□□□ -0.11
MSH5-209ENST00000450148 CYP2C18P33260 490 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 ARHGAP1Q07960 439 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 STXBP2Q15833 593 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 LY6KQ17RY6 165 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 SEPT14Q6ZU15 432 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 ZNF654Q8IZM8 581 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 RNPC3Q96LT9 517 aaKnown RBP14.35□□□□□ -0.11
MSH5-209ENST00000450148 PDCD2LQ9BRP1 358 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 MTG1Q9BT17 334 aaPredicted RBP14.35□□□□□ -0.11
MSH5-209ENST00000450148 MYL10Q9BUA6 226 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 NOC4LQ9BVI4 516 aaKnown RBP14.35□□□□□ -0.11
MSH5-209ENST00000450148 DDX41Q9UJV9 622 aaKnown RBP14.35□□□□□ -0.11
MSH5-209ENST00000450148 DOCK5Q9H7D0 1870 aa14.35□□□□□ -0.11
MSH5-209ENST00000450148 TANC1Q9C0D5 1861 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 DDAH1O94760 285 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 HOXA13P31271 388 aaPredicted RBP14.34□□□□□ -0.11
MSH5-209ENST00000450148 PPIGQ13427 754 aaKnown RBP eCLIP14.34□□□□□ -0.117e-8■■■□□ 19.2
MSH5-209ENST00000450148 ARHGEF16Q5VV41 709 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 CATIPQ7Z7H3 387 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 TMEM199Q8N511 208 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 IL31RAQ8NI17 732 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 TMEM87BQ96K49 555 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 SPZ1Q9BXG8 430 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 WNT8AQ9H1J5 351 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 TTYH1Q9H313 450 aaPredicted RBP14.34□□□□□ -0.11
MSH5-209ENST00000450148 HIPK3Q9H422 1215 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 ANO2Q9NQ90 1003 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 STXBP5LQ9Y2K9 1186 aa14.34□□□□□ -0.11
MSH5-209ENST00000450148 TET1Q8NFU7 2136 aa14.33□□□□□ -0.11
MSH5-209ENST00000450148 KPNA6O60684 536 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 EIF3JO75822 258 aaKnown RBP14.33□□□□□ -0.12
MSH5-209ENST00000450148 GH1P01241 217 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 MMP3P08254 477 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 ACRP10323 421 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 SMARCA1P28370 1054 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 MCM5P33992 734 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 LIFRP42702 1097 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 PGM5Q15124 567 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 NBPF20Q3BBV1 942 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 ZNF365Q70YC5 407 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 VSIG10LQ86VR7 867 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 PPP1R13LQ8WUF5 828 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 AFG1LQ8WV93 481 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms