RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 SUPT20HL2P0C7V6 817 aa25.5■■□□□ 1.67
CPSF7-208ENST00000450000 CHST3Q7LGC8 479 aa25.5■■□□□ 1.67
CPSF7-208ENST00000450000 SLC43A3Q8NBI5 491 aa25.5■■□□□ 1.67
CPSF7-208ENST00000450000 MAP4K1Q92918 833 aa25.5■■□□□ 1.67
CPSF7-208ENST00000450000 PCDHA1Q9Y5I3 950 aa25.5■■□□□ 1.67
CPSF7-208ENST00000450000 RBM8AQ9Y5S9 174 aaKnown RBP25.5■■□□□ 1.67
CPSF7-208ENST00000450000 SZT2Q5T011 3432 aa25.49■■□□□ 1.67
CPSF7-208ENST00000450000 PALM3A6NDB9 673 aaPredicted RBP25.49■■□□□ 1.67
CPSF7-208ENST00000450000 CSF2RAP15509 400 aa25.49■■□□□ 1.67
CPSF7-208ENST00000450000 CYP2C18P33260 490 aa25.49■■□□□ 1.67
CPSF7-208ENST00000450000 CHMP4BP1P59074 171 aa25.49■■□□□ 1.67
CPSF7-208ENST00000450000 GRM4Q14833 912 aa25.49■■□□□ 1.67
CPSF7-208ENST00000450000 PSRC1Q6PGN9 363 aaPredicted RBP25.49■■□□□ 1.67
CPSF7-208ENST00000450000 MTIF3Q9H2K0 278 aaKnown RBP25.49■■□□□ 1.67
CPSF7-208ENST00000450000 DNAH12Q6ZR08 3092 aa25.49■■□□□ 1.67
CPSF7-208ENST00000450000 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.48■■□□□ 1.67
CPSF7-208ENST00000450000 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.48■■□□□ 1.67
CPSF7-208ENST00000450000 EIF2AK2P19525 551 aaKnown RBP25.48■■□□□ 1.67
CPSF7-208ENST00000450000 PURAQ00577 322 aaKnown RBP25.48■■□□□ 1.67
CPSF7-208ENST00000450000 TRPV6Q9H1D0 765 aa25.48■■□□□ 1.67
CPSF7-208ENST00000450000 MAP3K20Q9NYL2 800 aaKnown RBP25.48■■□□□ 1.67
CPSF7-208ENST00000450000 B4GALT4O60513 344 aa25.47■■□□□ 1.67
CPSF7-208ENST00000450000 GH1P01241 217 aa25.47■■□□□ 1.67
CPSF7-208ENST00000450000 NFXL1Q6ZNB6 911 aa25.47■■□□□ 1.67
CPSF7-208ENST00000450000 CTCFLQ8NI51 663 aaPredicted RBP25.47■■□□□ 1.67
CPSF7-208ENST00000450000 COPS5Q92905 334 aa25.47■■□□□ 1.67
CPSF7-208ENST00000450000 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.47■■□□□ 1.671e-7■■■□□ 18.8
CPSF7-208ENST00000450000 EIF3JO75822 258 aaKnown RBP25.46■■□□□ 1.67
CPSF7-208ENST00000450000 ACRP10323 421 aa25.46■■□□□ 1.67
CPSF7-208ENST00000450000 PIGSQ96S52 555 aa25.46■■□□□ 1.67
CPSF7-208ENST00000450000 ALDH8A1Q9H2A2 487 aaPredicted RBP25.46■■□□□ 1.67
CPSF7-208ENST00000450000 COL20A1Q9P218 1284 aa25.46■■□□□ 1.67
CPSF7-208ENST00000450000 NOD1Q9Y239 953 aa25.46■■□□□ 1.67
CPSF7-208ENST00000450000 LAMA3Q16787 3333 aa25.45■■□□□ 1.67
CPSF7-208ENST00000450000 GRIN2DO15399 1336 aa25.45■■□□□ 1.66
CPSF7-208ENST00000450000 GCOM1H8Y6P7 765 aaPredicted RBP25.45■■□□□ 1.66
CPSF7-208ENST00000450000 NR3C2P08235 984 aa25.45■■□□□ 1.66
CPSF7-208ENST00000450000 POLR2MP0CAP2 368 aa25.45■■□□□ 1.66
CPSF7-208ENST00000450000 MYCLP12524 364 aaPredicted RBP25.45■■□□□ 1.66
CPSF7-208ENST00000450000 KIF5BP33176 963 aa25.45■■□□□ 1.66
CPSF7-208ENST00000450000 CCL23P55773 120 aa25.45■■□□□ 1.66
CPSF7-208ENST00000450000 CENPQQ7L2Z9 268 aaPredicted RBP25.45■■□□□ 1.66
CPSF7-208ENST00000450000 RPUSD2Q8IZ73 545 aaKnown RBP25.45■■□□□ 1.66
CPSF7-208ENST00000450000 SAMD3Q8N6K7 520 aa25.45■■□□□ 1.66
CPSF7-208ENST00000450000 IL23AQ9NPF7 189 aa25.45■■□□□ 1.66
CPSF7-208ENST00000450000 ANO2Q9NQ90 1003 aa25.45■■□□□ 1.66
CPSF7-208ENST00000450000 PXMP2Q9NR77 195 aa25.45■■□□□ 1.66
CPSF7-208ENST00000450000 MRVI1Q9Y6F6 885 aa25.45■■□□□ 1.66
CPSF7-208ENST00000450000 LRRC37A2A6NM11 1700 aa25.45■■□□□ 1.66
CPSF7-208ENST00000450000 CCDC69A6NI79 296 aa25.44■■□□□ 1.66
CPSF7-208ENST00000450000 A6NJR5 290 aa25.44■■□□□ 1.66
CPSF7-208ENST00000450000 MCM5P33992 734 aa25.44■■□□□ 1.66
CPSF7-208ENST00000450000 LY6KQ17RY6 165 aa25.44■■□□□ 1.66
CPSF7-208ENST00000450000 TMEM240Q5SV17 173 aa25.44■■□□□ 1.66
CPSF7-208ENST00000450000 STOX1Q6ZVD7 989 aa25.44■■□□□ 1.66
CPSF7-208ENST00000450000 ZNF365Q70YC5 407 aa25.44■■□□□ 1.66
CPSF7-208ENST00000450000 TMTC2Q8N394 836 aa25.44■■□□□ 1.66
CPSF7-208ENST00000450000 PIBF1Q8WXW3 757 aa25.44■■□□□ 1.66
CPSF7-208ENST00000450000 SEMA6BQ9H3T3 888 aa25.44■■□□□ 1.66
CPSF7-208ENST00000450000 PNMA6FA0A0J9YX94 578 aa25.43■■□□□ 1.66
CPSF7-208ENST00000450000 FGBP02675 491 aa25.43■■□□□ 1.66
CPSF7-208ENST00000450000 CASTP20810 708 aaKnown RBP25.43■■□□□ 1.66
CPSF7-208ENST00000450000 HSD17B4P51659 736 aa25.43■■□□□ 1.66
CPSF7-208ENST00000450000 NBPF20Q3BBV1 942 aa25.43■■□□□ 1.66
CPSF7-208ENST00000450000 MB21D2Q8IYB1 491 aaPredicted RBP25.43■■□□□ 1.66
CPSF7-208ENST00000450000 MTMR8Q96EF0 704 aa25.43■■□□□ 1.66
CPSF7-208ENST00000450000 ESYT1Q9BSJ8 1104 aa25.43■■□□□ 1.66
CPSF7-208ENST00000450000 NOC4LQ9BVI4 516 aaKnown RBP25.43■■□□□ 1.66
CPSF7-208ENST00000450000 RIOX1Q9H6W3 641 aa25.43■■□□□ 1.66
CPSF7-208ENST00000450000 TRMT13Q9NUP7 481 aaKnown RBP25.43■■□□□ 1.66
CPSF7-208ENST00000450000 TAF6LQ9Y6J9 622 aa25.43■■□□□ 1.66
CPSF7-208ENST00000450000 PRC1O43663 620 aa25.42■■□□□ 1.66
CPSF7-208ENST00000450000 ARIH2O95376 493 aa25.42■■□□□ 1.66
CPSF7-208ENST00000450000 HOXA13P31271 388 aaPredicted RBP25.42■■□□□ 1.66
CPSF7-208ENST00000450000 TROAPQ12815 778 aa25.42■■□□□ 1.66
CPSF7-208ENST00000450000 NFRKBQ6P4R8 1299 aa25.42■■□□□ 1.66
CPSF7-208ENST00000450000 FCHSD1Q86WN1 690 aa25.42■■□□□ 1.66
CPSF7-208ENST00000450000 RETREG2Q8NC44 543 aa25.42■■□□□ 1.66
CPSF7-208ENST00000450000 AFG1LQ8WV93 481 aa25.42■■□□□ 1.66
CPSF7-208ENST00000450000 GUCD1Q96NT3 240 aa25.42■■□□□ 1.66
CPSF7-208ENST00000450000 SENP2Q9HC62 589 aa25.42■■□□□ 1.66
CPSF7-208ENST00000450000 SEC63Q9UGP8 760 aaKnown RBP25.42■■□□□ 1.66
CPSF7-208ENST00000450000 LCTP09848 1927 aa25.41■■□□□ 1.66
CPSF7-208ENST00000450000 TMEM265A0A087WTH1 108 aa25.41■■□□□ 1.66
CPSF7-208ENST00000450000 DDAH1O94760 285 aa25.41■■□□□ 1.66
CPSF7-208ENST00000450000 PTPN11Q06124 597 aaPredicted RBP25.41■■□□□ 1.66
CPSF7-208ENST00000450000 RNF20Q5VTR2 975 aa25.41■■□□□ 1.66
CPSF7-208ENST00000450000 CCDC62Q6P9F0 684 aa25.41■■□□□ 1.66
CPSF7-208ENST00000450000 ZNF654Q8IZM8 581 aa25.41■■□□□ 1.66
CPSF7-208ENST00000450000 IGDCC4Q8TDY8 1250 aa25.41■■□□□ 1.66
CPSF7-208ENST00000450000 RRP36Q96EU6 259 aaKnown RBP25.41■■□□□ 1.66
CPSF7-208ENST00000450000 TMEM87BQ96K49 555 aa25.41■■□□□ 1.66
CPSF7-208ENST00000450000 CDX2Q99626 313 aaPredicted RBP25.41■■□□□ 1.66
CPSF7-208ENST00000450000 MTA3Q9BTC8 594 aa25.41■■□□□ 1.66
CPSF7-208ENST00000450000 PPP1R11O60927 126 aaPredicted RBP25.4■■□□□ 1.66
CPSF7-208ENST00000450000 CYP2C9P11712 490 aa25.4■■□□□ 1.66
CPSF7-208ENST00000450000 CCND2P30279 289 aa25.4■■□□□ 1.66
CPSF7-208ENST00000450000 GNAQP50148 359 aa25.4■■□□□ 1.66
CPSF7-208ENST00000450000 ANTXR2P58335 489 aa25.4■■□□□ 1.66
CPSF7-208ENST00000450000 LAMC2Q13753 1193 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms