RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 ARHGAP25P42331 645 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 MIGA2Q7L4E1 593 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 NT5C1BQ96P26 610 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 KANSL2Q9H9L4 492 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 LMBRD1Q9NUN5 540 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 BMP3P12645 472 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 SYDE2Q5VT97 1194 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 KIAA1841Q6NSI8 718 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 TRIML1Q8N9V2 468 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 ACCSQ96QU6 501 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 SPATS2LQ9NUQ6 558 aaKnown RBP15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 LAD1O00515 517 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 SCRN1Q12765 414 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 EEPD1Q7L9B9 569 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 NACC1Q96RE7 527 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 DPH5Q9H2P9 285 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 MAD1L1Q9Y6D9 718 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 GARSP41250 739 aaKnown RBP15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 EXOC8Q8IYI6 725 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 BBS5Q8N3I7 341 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 RASGRP4Q8TDF6 673 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 DESI2Q9BSY9 194 aa15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.26■□□□□ 0.03
RAPGEF3-205ENST00000449771 PSDA5PKW4 1024 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 ZNF500O60304 480 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 FMNL1O95466 1100 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 RBBP5Q15291 538 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 MAP7D3Q8IWC1 876 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 LARP4BQ92615 738 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 GDAP1L1Q96MZ0 367 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 PIGSQ96S52 555 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 PPP1R16BQ96T49 567 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 PBRM1Q86U86 1689 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 NEO1Q92859 1461 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 GAP43P17677 238 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 PPFIA1Q13136 1202 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 MAGEF1Q9HAY2 307 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 ZNF215Q9UL58 517 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 BRD1O95696 1058 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 ECE1P42892 770 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 BPIFB4P59827 614 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 CACTINQ8WUQ7 758 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 CABS1Q96KC9 395 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 CEP170P1Q96L14 293 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 TLR7Q9NYK1 1049 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 PCDHA7Q9UN72 937 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 ZNF148Q9UQR1 794 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 ZBTB33Q86T24 672 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 CCDC170Q8IYT3 715 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 COPRSQ9NQ92 184 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 TYW1Q9NV66 732 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 TXNDC9O14530 226 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 RNF40O75150 1001 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 LMNB1P20700 586 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 ZNF445P59923 1031 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 WHAMMP3Q1A5X7 153 aa15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 CNOT6LQ96LI5 555 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-205ENST00000449771 COBLO75128 1261 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 PSMC2P35998 433 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 NDUFA8P51970 172 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 ZMYM1Q5SVZ6 1142 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 CEP120Q8N960 986 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 GPR108Q9NPR9 543 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 PARD3BQ8TEW8 1205 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 RPGRIP1Q96KN7 1286 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 WDR11Q9BZH6 1224 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 DHX36Q9H2U1 1008 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 RIPOR2Q9Y4F9 1068 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 USP17L3A6NCW0 530 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 USP17L4A6NCW7 530 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 H2AFZP0C0S5 128 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 CIAPIN1Q6FI81 312 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 H2AFVQ71UI9 128 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 USP17L1Q7RTZ2 530 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 ADGRL2O95490 1459 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 SPATA1Q5VX52 437 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
RAPGEF3-205ENST00000449771 SRGAP2BP0DMP2 458 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 KRT3P12035 628 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 PEX19P40855 299 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 PPP2R5EQ16537 467 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 HDAC11Q96DB2 347 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 SERPINB13Q9UIV8 391 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 DBNLQ9UJU6 430 aaKnown RBP15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 PLEKHG1Q9ULL1 1385 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 NLRP1Q9C000 1473 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 SLC10A4Q96EP9 437 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 PPP1R12CQ9BZL4 782 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 PCIF1Q9H4Z3 704 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 ABCA5Q8WWZ7 1642 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 NPR1P16066 1061 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 CDHR1Q96JP9 859 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 SLC38A10Q9HBR0 1119 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 BCAP29Q9UHQ4 241 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 SLC12A6Q9UHW9 1150 aa15.23■□□□□ 0.03
RAPGEF3-205ENST00000449771 ATP8B3O60423 1300 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms