RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 RMDN3Q96TC7 470 aa15.2■□□□□ 0.02
SEC22C-209ENST00000449617 PCDHA1Q9Y5I3 950 aa15.2■□□□□ 0.02
SEC22C-209ENST00000449617 GRIN2DO15399 1336 aa15.2■□□□□ 0.02
SEC22C-209ENST00000449617 NKRFO15226 690 aaKnown RBP eCLIP15.19■□□□□ 0.02
SEC22C-209ENST00000449617 EPHB4P54760 987 aa15.19■□□□□ 0.02
SEC22C-209ENST00000449617 PSMC6P62333 389 aa15.19■□□□□ 0.02
SEC22C-209ENST00000449617 ITGA7Q13683 1181 aa15.19■□□□□ 0.02
SEC22C-209ENST00000449617 CASC1Q6TDU7 716 aa15.19■□□□□ 0.02
SEC22C-209ENST00000449617 ZNF654Q8IZM8 581 aa15.19■□□□□ 0.02
SEC22C-209ENST00000449617 SLC43A3Q8NBI5 491 aa15.19■□□□□ 0.02
SEC22C-209ENST00000449617 COPS5Q92905 334 aa15.19■□□□□ 0.02
SEC22C-209ENST00000449617 RIOX1Q9H6W3 641 aa15.19■□□□□ 0.02
SEC22C-209ENST00000449617 SH2B2O14492 632 aaPredicted RBP15.18■□□□□ 0.02
SEC22C-209ENST00000449617 TLR3O15455 904 aaKnown RBP15.18■□□□□ 0.02
SEC22C-209ENST00000449617 ARIH2O95376 493 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 TIMP1P01033 207 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 TXNP10599 105 aaKnown RBP15.18■□□□□ 0.02
SEC22C-209ENST00000449617 EIF2AK2P19525 551 aaKnown RBP15.18■□□□□ 0.02
SEC22C-209ENST00000449617 MCM5P33992 734 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 CPT1AP50416 773 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 HSD17B4P51659 736 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 GHRHRQ02643 423 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 FPGSQ05932 587 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 TTLL4Q14679 1199 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 NECTIN1Q15223 517 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 ARHGEF16Q5VV41 709 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 Q7L0L9 218 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 DEFB123Q8N688 67 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 IWS1Q96ST2 819 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 MYL10Q9BUA6 226 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 PXMP2Q9NR77 195 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 SCN10AQ9Y5Y9 1956 aa15.18■□□□□ 0.02
SEC22C-209ENST00000449617 DDAH1O94760 285 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 CD4P01730 458 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 MYL3P08590 195 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 HOXA13P31271 388 aaPredicted RBP15.17■□□□□ 0.02
SEC22C-209ENST00000449617 PURAQ00577 322 aaKnown RBP15.17■□□□□ 0.02
SEC22C-209ENST00000449617 STXBP2Q15833 593 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 SEPT14Q6ZU15 432 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 PIBF1Q8WXW3 757 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 MTA3Q9BTC8 594 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 PPP1R12CQ9BZL4 782 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 POLR3EQ9NVU0 708 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 PNMA6FA0A0J9YX94 578 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 CDC45O75419 566 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 BRDTQ58F21 947 aaPredicted RBP15.17■□□□□ 0.02
SEC22C-209ENST00000449617 CCDC62Q6P9F0 684 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 NFXL1Q6ZNB6 911 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 CTCFLQ8NI51 663 aaPredicted RBP15.17■□□□□ 0.02
SEC22C-209ENST00000449617 CCDC136Q96JN2 1154 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 TMEM87BQ96K49 555 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 MAP3K14Q99558 947 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 TRPV6Q9H1D0 765 aa15.17■□□□□ 0.02
SEC22C-209ENST00000449617 CCDC69A6NI79 296 aa15.16■□□□□ 0.02
SEC22C-209ENST00000449617 A6NJR5 290 aa15.16■□□□□ 0.02
SEC22C-209ENST00000449617 B4GALT4O60513 344 aa15.16■□□□□ 0.02
SEC22C-209ENST00000449617 NR3C2P08235 984 aa15.16■□□□□ 0.02
SEC22C-209ENST00000449617 KIF5BP33176 963 aa15.16■□□□□ 0.02
SEC22C-209ENST00000449617 TRAF1Q13077 416 aa15.16■□□□□ 0.02
SEC22C-209ENST00000449617 MFSD5Q6N075 450 aa15.16■□□□□ 0.02
SEC22C-209ENST00000449617 RNPC3Q96LT9 517 aaKnown RBP15.16■□□□□ 0.02
SEC22C-209ENST00000449617 MTG1Q9BT17 334 aaPredicted RBP15.16■□□□□ 0.02
SEC22C-209ENST00000449617 SPZ1Q9BXG8 430 aa15.16■□□□□ 0.02
SEC22C-209ENST00000449617 SEZ6LQ9BYH1 1024 aa15.16■□□□□ 0.02
SEC22C-209ENST00000449617 LRRC2Q9BYS8 371 aa15.16■□□□□ 0.02
SEC22C-209ENST00000449617 MAP3K20Q9NYL2 800 aaKnown RBP15.16■□□□□ 0.02
SEC22C-209ENST00000449617 GCOM1H8Y6P7 765 aaPredicted RBP15.15■□□□□ 0.02
SEC22C-209ENST00000449617 EIF3JO75822 258 aaKnown RBP15.15■□□□□ 0.02
SEC22C-209ENST00000449617 POLR2MP0CAP2 368 aa15.15■□□□□ 0.02
SEC22C-209ENST00000449617 RXRAP19793 462 aa15.15■□□□□ 0.02
SEC22C-209ENST00000449617 CYP2C18P33260 490 aa15.15■□□□□ 0.02
SEC22C-209ENST00000449617 LIFRP42702 1097 aa15.15■□□□□ 0.02
SEC22C-209ENST00000449617 LY6KQ17RY6 165 aa15.15■□□□□ 0.02
SEC22C-209ENST00000449617 RNF20Q5VTR2 975 aa15.15■□□□□ 0.02
SEC22C-209ENST00000449617 TMTC2Q8N394 836 aa15.15■□□□□ 0.02
SEC22C-209ENST00000449617 SAMD3Q8N6K7 520 aa15.15■□□□□ 0.02
SEC22C-209ENST00000449617 IL31RAQ8NI17 732 aa15.15■□□□□ 0.02
SEC22C-209ENST00000449617 PDCD2LQ9BRP1 358 aa15.15■□□□□ 0.02
SEC22C-209ENST00000449617 ALDH8A1Q9H2A2 487 aaPredicted RBP15.15■□□□□ 0.02
SEC22C-209ENST00000449617 HIPK3Q9H422 1215 aa15.15■□□□□ 0.02
SEC22C-209ENST00000449617 CDH23Q9H251 3354 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 KPNA6O60684 536 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 PLEKHA8P1O95397 391 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 GH1P01241 217 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 MYCLP12524 364 aaPredicted RBP15.14■□□□□ 0.01
SEC22C-209ENST00000449617 CSF2RAP15509 400 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 ARHGAP1Q07960 439 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 PPIGQ13427 754 aaKnown RBP eCLIP15.14■□□□□ 0.01
SEC22C-209ENST00000449617 FCHSD1Q86WN1 690 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 RAB11FIP4Q86YS3 637 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 TMEM199Q8N511 208 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 AFG1LQ8WV93 481 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 RRP36Q96EU6 259 aaKnown RBP15.14■□□□□ 0.01
SEC22C-209ENST00000449617 TRMT13Q9NUP7 481 aaKnown RBP15.14■□□□□ 0.01
SEC22C-209ENST00000449617 MTMR10Q9NXD2 777 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 UMODL1Q5DID0 1318 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 MYH7BA7E2Y1 1941 aa15.14■□□□□ 0.01
SEC22C-209ENST00000449617 PGM5Q15124 567 aa15.13■□□□□ 0.01
SEC22C-209ENST00000449617 NBPF20Q3BBV1 942 aa15.13■□□□□ 0.01
SEC22C-209ENST00000449617 SRBD1Q8N5C6 995 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms