RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 MRPL11Q9Y3B7 192 aaKnown RBP11.3□□□□□ -0.6
CCDC171-203ENST00000449575 DOCK5Q9H7D0 1870 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 AKAP17AQ02040 695 aaKnown RBP11.3□□□□□ -0.6
CCDC171-203ENST00000449575 ZNF792Q3KQV3 632 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 TRIM22Q8IYM9 498 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 SH3TC2Q8TF17 1288 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 ZFP91Q96JP5 570 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-203ENST00000449575 TAAR1Q96RJ0 339 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 FBXO40Q9UH90 709 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 KCNJ14Q9UNX9 436 aa11.3□□□□□ -0.6
CCDC171-203ENST00000449575 K7ELQ4 463 aaPredicted RBP11.29□□□□□ -0.6
CCDC171-203ENST00000449575 DEXIO95424 95 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 MYCP01106 439 aaPredicted RBP11.29□□□□□ -0.6
CCDC171-203ENST00000449575 COPB2P35606 906 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 ZNF445P59923 1031 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 UBXN2AP68543 259 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 CPLX2Q6PUV4 134 aaKnown RBP11.29□□□□□ -0.6
CCDC171-203ENST00000449575 FCHSD1Q86WN1 690 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 ABRAQ8N0Z2 381 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 SYTL5Q8TDW5 730 aaPredicted RBP11.29□□□□□ -0.6
CCDC171-203ENST00000449575 MAML3Q96JK9 1138 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 PGBD1Q96JS3 809 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 TMEM260Q9NX78 707 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 MCM2P49736 904 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 HSD17B4P51659 736 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 NPY5RQ15761 445 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 RAET1EQ8TD07 263 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 RASGRP4Q8TDF6 673 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 SOCS4Q8WXH5 440 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 GTPBP4Q9BZE4 634 aaKnown RBP11.29□□□□□ -0.6
CCDC171-203ENST00000449575 PSTPIP2Q9H939 334 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
CCDC171-203ENST00000449575 SMCO2A6NFE2 343 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 POTEB2H3BUK9 544 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 ADCY3O60266 1144 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 CDKL5O76039 1030 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 CYP2C19P33261 490 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 RGS2P41220 211 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 GUCY1B3Q02153 619 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 CUL4AQ13619 759 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 APBA2Q99767 749 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 ALG1Q9BT22 464 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 MCOLN1Q9GZU1 580 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 GNRH1P01148 92 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 HOXC6P09630 235 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 HOXD10P28358 340 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 PRAMEF19Q5SWL8 479 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 IL31RAQ8NI17 732 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 BIN2Q9UBW5 565 aaPredicted RBP11.28□□□□□ -0.6
CCDC171-203ENST00000449575 ZKSCAN5Q9Y2L8 839 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 PFASO15067 1338 aa11.28□□□□□ -0.6
CCDC171-203ENST00000449575 KIF20AO95235 890 aa11.27□□□□□ -0.6
CCDC171-203ENST00000449575 IGHA2P01877 340 aa11.27□□□□□ -0.6
CCDC171-203ENST00000449575 GHRHRQ02643 423 aa11.27□□□□□ -0.6
CCDC171-203ENST00000449575 IRF5Q13568 498 aa11.27□□□□□ -0.6
CCDC171-203ENST00000449575 OXER1Q8TDS5 423 aa11.27□□□□□ -0.6
CCDC171-203ENST00000449575 PDLIM2Q96JY6 352 aa11.27□□□□□ -0.6
CCDC171-203ENST00000449575 ZMYND12Q9H0C1 365 aa11.27□□□□□ -0.6
CCDC171-203ENST00000449575 GCOM1H8Y6P7 765 aaPredicted RBP11.27□□□□□ -0.61
CCDC171-203ENST00000449575 POLR2MP0CAP2 368 aa11.27□□□□□ -0.61
CCDC171-203ENST00000449575 EIF2AK2P19525 551 aaKnown RBP11.27□□□□□ -0.61
CCDC171-203ENST00000449575 PTGS1P23219 599 aa11.27□□□□□ -0.61
CCDC171-203ENST00000449575 GJB2P29033 226 aa11.27□□□□□ -0.61
CCDC171-203ENST00000449575 EEPD1Q7L9B9 569 aa11.27□□□□□ -0.61
CCDC171-203ENST00000449575 MCF2L2Q86YR7 1114 aa11.27□□□□□ -0.61
CCDC171-203ENST00000449575 RGS22Q8NE09 1264 aa11.27□□□□□ -0.61
CCDC171-203ENST00000449575 LLPHQ9BRT6 129 aaKnown RBP11.27□□□□□ -0.61
CCDC171-203ENST00000449575 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
CCDC171-203ENST00000449575 CCDC39Q9UFE4 941 aa11.27□□□□□ -0.61
CCDC171-203ENST00000449575 PNMA2Q9UL42 364 aa11.27□□□□□ -0.61
CCDC171-203ENST00000449575 FRMPD3Q5JV73 1810 aa11.27□□□□□ -0.61
CCDC171-203ENST00000449575 SNAI1O95863 264 aaPredicted RBP11.26□□□□□ -0.61
CCDC171-203ENST00000449575 XRCC5P13010 732 aaKnown RBP11.26□□□□□ -0.61
CCDC171-203ENST00000449575 GRK4P32298 578 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 ALDH5A1P51649 535 aaPredicted RBP11.26□□□□□ -0.61
CCDC171-203ENST00000449575 ADCY7P51828 1080 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 ARHGEF6Q15052 776 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 FBXO46Q6PJ61 603 aaPredicted RBP11.26□□□□□ -0.61
CCDC171-203ENST00000449575 RIC8AQ9NPQ8 531 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 CLK2P49760 499 aaKnown RBP11.26□□□□□ -0.61
CCDC171-203ENST00000449575 MTFR1Q15390 333 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 TMEM63BQ5T3F8 832 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 TRPV1Q8NER1 839 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 CUL5Q93034 780 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 RMDN3Q96TC7 470 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 TINF2Q9BSI4 451 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 PHF20Q9BVI0 1012 aa11.26□□□□□ -0.61
CCDC171-203ENST00000449575 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 PIK3CDO00329 1044 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 NLRP5P59047 1200 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 CACNB2Q08289 660 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-203ENST00000449575 EARS2Q5JPH6 523 aaKnown RBP11.25□□□□□ -0.61
CCDC171-203ENST00000449575 ARMCX2Q7L311 632 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-203ENST00000449575 PXMP2Q9NR77 195 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 FAM205CA6NFA0 338 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 M0R2N6 131 aa11.25□□□□□ -0.61
CCDC171-203ENST00000449575 LETM1O95202 739 aaPredicted RBP11.25□□□□□ -0.61
CCDC171-203ENST00000449575 INHAP05111 366 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms