RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 STAG3L1P0CL83 205 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 SRGAP2CP0DJJ0 459 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 KRT13P13646 458 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 ADD1P35611 737 aaKnown RBP9.49□□□□□ -0.89
HCG18-238ENST00000449544 CASP7P55210 303 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 CCL23P55773 120 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 UBE2SQ16763 222 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 BLIDQ8IZY5 108 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 PGBD1Q96JS3 809 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 NACC1Q96RE7 527 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 C11orf49Q9H6J7 331 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 STK24Q9Y6E0 443 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 MROH7Q68CQ1 1323 aa9.49□□□□□ -0.89
HCG18-238ENST00000449544 ABL1P00519 1130 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 ACVR2BQ13705 512 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 USP17L6PQ6QN14 398 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 MMRN2Q9H8L6 949 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 INCENPQ9NQS7 918 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 ZNF521Q96K83 1311 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 IRS2Q9Y4H2 1338 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 LTN1O94822 1766 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 RPS6P62753 249 aaKnown RBP9.48□□□□□ -0.89
HCG18-238ENST00000449544 BIRC3Q13489 604 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 FSCN1Q16658 493 aaKnown RBP9.48□□□□□ -0.89
HCG18-238ENST00000449544 CXCL17Q6UXB2 119 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 RUFY3Q7L099 469 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 TLK2Q86UE8 772 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 ZNF589Q86UQ0 364 aaPredicted RBP9.48□□□□□ -0.89
HCG18-238ENST00000449544 KAZALD1Q96I82 304 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 MTG1Q9BT17 334 aaPredicted RBP9.48□□□□□ -0.89
HCG18-238ENST00000449544 FAM50BQ9Y247 325 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 SLC4A7Q9Y6M7 1214 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 XPOTO43592 962 aaKnown RBP9.48□□□□□ -0.89
HCG18-238ENST00000449544 CYP2C9P11712 490 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 RPS6KB1P23443 525 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 USP8P40818 1118 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 ASIC1P78348 528 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 KRT17Q04695 432 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 INF2Q27J81 1249 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 RRAGBQ5VZM2 374 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 CYFIP1Q7L576 1253 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 SLFN12Q8IYM2 578 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 THNSL1Q8IYQ7 743 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 TRMT2AQ8IZ69 625 aaKnown RBP9.48□□□□□ -0.89
HCG18-238ENST00000449544 ADGRF4Q8IZF3 695 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 TSHZ2Q9NRE2 1034 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 DDX25Q9UHL0 483 aaKnown RBP9.48□□□□□ -0.89
HCG18-238ENST00000449544 KCNJ14Q9UNX9 436 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 SNCAIPQ9Y6H5 919 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 SLC8A3P57103 927 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 ARMCX2Q7L311 632 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 SEPT1Q8WYJ6 367 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 PYM1Q9BRP8 204 aaKnown RBP9.48□□□□□ -0.89
HCG18-238ENST00000449544 USP26Q9BXU7 913 aa9.48□□□□□ -0.89
HCG18-238ENST00000449544 NEMFO60524 1076 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 KRT19P08727 400 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 ZNF543Q08ER8 600 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 PPP2R5AQ15172 486 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 TREML2Q5T2D2 321 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 CATSPERGQ6ZRH7 1159 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 NEK8Q86SG6 692 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 hCG_1984214I3L0E3 225 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 ORC4O43929 436 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 ANAPC15P60006 121 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 TRPC3Q13507 836 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 ZNF713Q8N859 430 aaPredicted RBP9.47□□□□□ -0.89
HCG18-238ENST00000449544 SMARCAD1Q9H4L7 1026 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 EXOC7Q9UPT5 735 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 CNTNAP1P78357 1384 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 TBC1D12O60347 775 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 PTMSP20962 102 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 GJB2P29033 226 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 STAP2Q9UGK3 403 aa9.47□□□□□ -0.89
HCG18-238ENST00000449544 DDX49Q9Y6V7 483 aaKnown RBP9.47□□□□□ -0.89
HCG18-238ENST00000449544 RGPD1P0DJD0 1748 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 C17orf102A2RUQ5 167 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 RPS6KA5O75582 802 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 EIF3JO75822 258 aaKnown RBP9.46□□□□□ -0.89
HCG18-238ENST00000449544 ITGBL1O95965 494 aaPredicted RBP9.46□□□□□ -0.89
HCG18-238ENST00000449544 STAT5BP51692 787 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 RAD51AP2Q09MP3 1159 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 HINFPQ9BQA5 517 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 GCOM2Q9BZD3 368 aaPredicted RBP9.46□□□□□ -0.89
HCG18-238ENST00000449544 PCDHA6Q9UN73 950 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 PCDHA8Q9Y5H6 950 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 PHRF1Q9P1Y6 1649 aaKnown RBP9.46□□□□□ -0.89
HCG18-238ENST00000449544 PDS5AQ29RF7 1337 aaKnown RBP9.46□□□□□ -0.89
HCG18-238ENST00000449544 VWA3AA6NCI4 1184 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 VWA5AO00534 786 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 USO1O60763 962 aaKnown RBP9.46□□□□□ -0.89
HCG18-238ENST00000449544 PTPREP23469 700 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 PTH1RQ03431 593 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 GALNT17Q6IS24 598 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 TBC1D22BQ9NU19 505 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 WBP1LQ9NX94 342 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 SAGE1Q9NXZ1 904 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 HPS5Q9UPZ3 1129 aa9.46□□□□□ -0.89
HCG18-238ENST00000449544 DPYSL4O14531 572 aa9.46□□□□□ -0.9
HCG18-238ENST00000449544 NKRFO15226 690 aaKnown RBP eCLIP9.46□□□□□ -0.9
HCG18-238ENST00000449544 BEX3Q00994 111 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms