RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 GTF2F1P35269 517 aaKnown RBP eCLIP18.09■□□□□ 0.49
AP000253.1-201ENST00000449339 PTPN14Q15678 1187 aa18.09■□□□□ 0.49
AP000253.1-201ENST00000449339 TMX1Q9H3N1 280 aa18.09■□□□□ 0.49
AP000253.1-201ENST00000449339 VCPKMTQ9H867 229 aa18.09■□□□□ 0.49
AP000253.1-201ENST00000449339 MAGEF1Q9HAY2 307 aa18.09■□□□□ 0.49
AP000253.1-201ENST00000449339 GDAQ9Y2T3 454 aa18.09■□□□□ 0.49
AP000253.1-201ENST00000449339 TNFAIP1Q13829 316 aa18.08■□□□□ 0.49
AP000253.1-201ENST00000449339 KCNB1Q14721 858 aa18.08■□□□□ 0.49
AP000253.1-201ENST00000449339 ARHGAP27Q6ZUM4 889 aa18.08■□□□□ 0.49
AP000253.1-201ENST00000449339 CTAGE1Q96RT6 745 aa18.08■□□□□ 0.49
AP000253.1-201ENST00000449339 RIOK3O14730 519 aaKnown RBP18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 COBLO75128 1261 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 PRCPP42785 496 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 GOLGA8FQ08AF8 430 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 GOLGA8DPQ0D2H9 430 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 PRAMEF18Q5VWM3 479 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 CEP135Q66GS9 1140 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 CCDC174Q6PII3 467 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 NELFBQ8WX92 580 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 KIFC2Q96AC6 838 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 MMTAG2Q9BU76 263 aaKnown RBP18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 ZNF341Q9BYN7 854 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 ANO3Q9BYT9 981 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 DEFB129Q9H1M3 183 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 FBXO28Q9NVF7 368 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 MAPK8IP1Q9UQF2 711 aa18.08■□□□□ 0.48
AP000253.1-201ENST00000449339 OPLAHO14841 1288 aa18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 ASNSP08243 561 aa18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 DGKZQ13574 1117 aa18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 KMT5BQ4FZB7 885 aa18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 NBPF12Q5TAG4 269 aaPredicted RBP18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 ADD3Q9UEY8 706 aaKnown RBP18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 DDX25Q9UHL0 483 aaKnown RBP18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 KLRC4O43908 158 aa18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 FXR2P51116 673 aaKnown RBP eCLIP18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 PPP4R3AQ6IN85 833 aa18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 TRPM4Q8TD43 1214 aa18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 PAXBP1Q9Y5B6 917 aa18.07■□□□□ 0.48
AP000253.1-201ENST00000449339 POTEMA6NI47 508 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 TEX33O43247 280 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 RHOBTB3O94955 611 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 HOXA13P31271 388 aaPredicted RBP18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 MMP14P50281 582 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 SEMA3FQ13275 785 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 TMEM266Q2M3C6 531 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 ADSSL1Q8N142 457 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 HAS1Q92839 578 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 CALML4Q96GE6 196 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 FEZ1Q99689 392 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 GLT8D2Q9H1C3 349 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 LRWD1Q9UFC0 647 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 FZD1Q9UP38 647 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 ZNF592Q92610 1267 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 PPP1R13BQ96KQ4 1090 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 TRIM9Q9C026 710 aa18.06■□□□□ 0.48
AP000253.1-201ENST00000449339 SRCAPQ6ZRS2 3230 aa18.05■□□□□ 0.48
AP000253.1-201ENST00000449339 INPP5BP32019 993 aa18.05■□□□□ 0.48
AP000253.1-201ENST00000449339 FILIP1LQ4L180 1135 aa18.05■□□□□ 0.48
AP000253.1-201ENST00000449339 ANGEL2Q5VTE6 544 aaKnown RBP18.05■□□□□ 0.48
AP000253.1-201ENST00000449339 TC2NQ8N9U0 490 aa18.05■□□□□ 0.48
AP000253.1-201ENST00000449339 GIMAP8Q8ND71 665 aaPredicted RBP18.05■□□□□ 0.48
AP000253.1-201ENST00000449339 RAB34Q9BZG1 259 aa18.05■□□□□ 0.48
AP000253.1-201ENST00000449339 ADKP55263 362 aaKnown RBP18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 TMEM139Q8IV31 216 aa18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 TBC1D5Q92609 795 aa18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 NUDT12Q9BQG2 462 aa18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 FHDC1Q9C0D6 1143 aaPredicted RBP18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 SH2D4AQ9H788 454 aa18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 SPON1Q9HCB6 807 aa18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 LRRC10BA6NIK2 292 aa18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 H7C1D1 291 aa18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 AMPD3Q01432 767 aa18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 SPAG1Q07617 926 aa18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 PDIA5Q14554 519 aa18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 BAG1Q99933 345 aaPredicted RBP18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 C7orf25Q9BPX7 421 aa18.04■□□□□ 0.48
AP000253.1-201ENST00000449339 ARHGAP6O43182 974 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 PBX1P40424 430 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 AP3B2Q13367 1082 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 STIM1Q13586 685 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 KRT31Q15323 416 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 CHURC1Q8WUH1 139 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 RANBP17Q9H2T7 1088 aaKnown RBP18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 LIMA1Q9UHB6 759 aaKnown RBP18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 DICER1Q9UPY3 1922 aaKnown RBP18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 KIF2AO00139 706 aaPredicted RBP18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 MARCH6O60337 910 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 GCFC2P16383 781 aaKnown RBP18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 CCT6AP40227 531 aaKnown RBP18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 EPS15P42566 896 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 ARHGAP4P98171 946 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 GRB10Q13322 594 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 CRYGNQ8WXF5 182 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 TSC1Q92574 1164 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 PNMA5Q96PV4 448 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 SBF1O95248 1867 aa18.03■□□□□ 0.48
AP000253.1-201ENST00000449339 TRIM49BA6NDI0 452 aa18.02■□□□□ 0.48
AP000253.1-201ENST00000449339 PSMA7O14818 248 aa18.02■□□□□ 0.48
AP000253.1-201ENST00000449339 CCP110O43303 1012 aa18.02■□□□□ 0.48
AP000253.1-201ENST00000449339 STX10O60499 249 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms