RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 RNF207Q6ZRF8 634 aa16.89■□□□□ 0.29
USP39-206ENST00000448971 C16orf59Q7L2K0 433 aa16.89■□□□□ 0.29
USP39-206ENST00000448971 ARMCX2Q7L311 632 aa16.89■□□□□ 0.29
USP39-206ENST00000448971 FAM133AQ8N9E0 248 aa16.89■□□□□ 0.29
USP39-206ENST00000448971 KCNB2Q92953 911 aa16.89■□□□□ 0.29
USP39-206ENST00000448971 FGD4Q96M96 766 aa16.89■□□□□ 0.29
USP39-206ENST00000448971 MAP3K14Q99558 947 aa16.89■□□□□ 0.29
USP39-206ENST00000448971 AMNQ9BXJ7 453 aa16.89■□□□□ 0.29
USP39-206ENST00000448971 STARD7Q9NQZ5 370 aa16.89■□□□□ 0.29
USP39-206ENST00000448971 FAM184BQ9ULE4 1060 aa16.89■□□□□ 0.29
USP39-206ENST00000448971 NAP1L2Q9ULW6 460 aaPredicted RBP16.89■□□□□ 0.29
USP39-206ENST00000448971 MCM3APO60318 1980 aa16.88■□□□□ 0.29
USP39-206ENST00000448971 MYADML2A6NDP7 307 aa16.88■□□□□ 0.29
USP39-206ENST00000448971 MOXD2PA6NHM9 499 aa16.88■□□□□ 0.29
USP39-206ENST00000448971 DCDC2CA8MYV0 355 aa16.88■□□□□ 0.29
USP39-206ENST00000448971 DUSP11O75319 330 aaKnown RBP16.88■□□□□ 0.29
USP39-206ENST00000448971 CPA1P15085 419 aa16.88■□□□□ 0.29
USP39-206ENST00000448971 CASTP20810 708 aaKnown RBP16.88■□□□□ 0.29
USP39-206ENST00000448971 PSMA5P28066 241 aa16.88■□□□□ 0.29
USP39-206ENST00000448971 IRX5P78411 483 aaPredicted RBP16.88■□□□□ 0.29
USP39-206ENST00000448971 BAATQ14032 418 aaPredicted RBP16.88■□□□□ 0.29
USP39-206ENST00000448971 SGMS1Q86VZ5 419 aa16.88■□□□□ 0.29
USP39-206ENST00000448971 CLEC4DQ8WXI8 215 aa16.88■□□□□ 0.29
USP39-206ENST00000448971 PIBF1Q8WXW3 757 aa16.88■□□□□ 0.29
USP39-206ENST00000448971 PIGSQ96S52 555 aa16.88■□□□□ 0.29
USP39-206ENST00000448971 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.88■□□□□ 0.29
USP39-206ENST00000448971 TBX21Q9UL17 535 aa16.88■□□□□ 0.29
USP39-206ENST00000448971 LRRC37A2A6NM11 1700 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 SOWAHBA6NEL2 793 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 ASB14A6NK59 587 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 ADCY6O43306 1168 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 PLEKHA8P1O95397 391 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 DNAJB2P25686 324 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 CST5P28325 142 aaPredicted RBP16.87■□□□□ 0.29
USP39-206ENST00000448971 GNAQP50148 359 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 RPS6P62753 249 aaKnown RBP16.87■□□□□ 0.29
USP39-206ENST00000448971 EXOSC10Q01780 885 aaKnown RBP16.87■□□□□ 0.29
USP39-206ENST00000448971 APOA5Q6Q788 366 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.87■□□□□ 0.293e-12■■□□□ 13.5
USP39-206ENST00000448971 USP26Q9BXU7 913 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 RIOX1Q9H6W3 641 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 PRDM6Q9NQX0 595 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 ADD3Q9UEY8 706 aaKnown RBP16.87■□□□□ 0.29
USP39-206ENST00000448971 SEC63Q9UGP8 760 aaKnown RBP16.87■□□□□ 0.29
USP39-206ENST00000448971 MRPL11Q9Y3B7 192 aaKnown RBP16.87■□□□□ 0.29
USP39-206ENST00000448971 ELP1O95163 1332 aa16.87■□□□□ 0.29
USP39-206ENST00000448971 KLF18A0A0U1RQI7 1052 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 GOLGA8AA7E2F4 631 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 GOLGA8BA8MQT2 603 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 ZBTB43O43298 467 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 CYTH3O43739 400 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 TRAF1Q13077 416 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 ACVR2BQ13705 512 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 SLC35G1Q2M3R5 365 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 RASIP1Q5U651 963 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 MFSD5Q6N075 450 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 Q6ZUG5 572 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 MCF2L2Q86YR7 1114 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 USP38Q8NB14 1042 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 MTMR8Q96EF0 704 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 RRP36Q96EU6 259 aaKnown RBP16.86■□□□□ 0.29
USP39-206ENST00000448971 PURBQ96QR8 312 aaKnown RBP16.86■□□□□ 0.29
USP39-206ENST00000448971 MPHOSPH6Q99547 160 aaKnown RBP16.86■□□□□ 0.29
USP39-206ENST00000448971 LZTS2Q9BRK4 669 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 SPZ1Q9BXG8 430 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 ZNF576Q9H609 170 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 LCTP09848 1927 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 MYH6P13533 1939 aa16.86■□□□□ 0.29
USP39-206ENST00000448971 CHD7Q9P2D1 2997 aa16.85■□□□□ 0.29
USP39-206ENST00000448971 EIF5BO60841 1220 aaKnown RBP16.85■□□□□ 0.29
USP39-206ENST00000448971 PPP1R11O60927 126 aaPredicted RBP16.85■□□□□ 0.29
USP39-206ENST00000448971 ASGR1P07306 291 aa16.85■□□□□ 0.29
USP39-206ENST00000448971 ALDH5A1P51649 535 aaPredicted RBP16.85■□□□□ 0.29
USP39-206ENST00000448971 TMEM240Q5SV17 173 aa16.85■□□□□ 0.29
USP39-206ENST00000448971 SYMPKQ92797 1274 aaKnown RBP16.85■□□□□ 0.29
USP39-206ENST00000448971 BRF1Q92994 677 aa16.85■□□□□ 0.29
USP39-206ENST00000448971 UPF3AQ9H1J1 476 aaKnown RBP16.85■□□□□ 0.29
USP39-206ENST00000448971 ABHD16BQ9H3Z7 469 aa16.85■□□□□ 0.29
USP39-206ENST00000448971 PCDHA1Q9Y5I3 950 aa16.85■□□□□ 0.29
USP39-206ENST00000448971 ASTN1O14525 1302 aa16.85■□□□□ 0.29
USP39-206ENST00000448971 PNMA6FA0A0J9YX94 578 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 CTAGE5O15320 804 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 CFBP00751 764 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 GJA9P57773 515 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 NKX3-2P78367 333 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 RTN1Q16799 776 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 CCDC144BQ3MJ40 725 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 TMTC3Q6ZXV5 915 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 EEPD1Q7L9B9 569 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 FBXO16Q8IX29 292 aaPredicted RBP16.84■□□□□ 0.29
USP39-206ENST00000448971 CMTR1Q8N1G2 835 aaKnown RBP16.84■□□□□ 0.29
USP39-206ENST00000448971 FANCBQ8NB91 859 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 PCSK9Q8NBP7 692 aaKnown RBP16.84■□□□□ 0.29
USP39-206ENST00000448971 TIFAQ96CG3 184 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 GLT1D1Q96MS3 346 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 KATNBL1Q9H079 304 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 RBM28Q9NW13 759 aaKnown RBP16.84■□□□□ 0.29
USP39-206ENST00000448971 BRPF3Q9ULD4 1205 aa16.84■□□□□ 0.29
USP39-206ENST00000448971 DDX49Q9Y6V7 483 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms