RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 PRR5LQ6MZQ0 368 aa7.77□□□□□ -1.17
USP49-205ENST00000448078 CCDC84Q86UT8 332 aaPredicted RBP7.77□□□□□ -1.17
USP49-205ENST00000448078 SYNE4Q8N205 404 aa7.77□□□□□ -1.17
USP49-205ENST00000448078 BACH2Q9BYV9 841 aa7.77□□□□□ -1.17
USP49-205ENST00000448078 ZNF277Q9NRM2 450 aaPredicted RBP7.77□□□□□ -1.17
USP49-205ENST00000448078 KLHL3Q9UH77 587 aa7.77□□□□□ -1.17
USP49-205ENST00000448078 ZBTB1Q9Y2K1 713 aa7.77□□□□□ -1.17
USP49-205ENST00000448078 MAP2P11137 1827 aaKnown RBP7.77□□□□□ -1.17
USP49-205ENST00000448078 FZD9O00144 591 aa7.76□□□□□ -1.17
USP49-205ENST00000448078 IL6STP40189 918 aaPredicted RBP7.76□□□□□ -1.17
USP49-205ENST00000448078 IARSP41252 1262 aaKnown RBP7.76□□□□□ -1.17
USP49-205ENST00000448078 RING1Q06587 406 aa7.76□□□□□ -1.17
USP49-205ENST00000448078 NKG7Q16617 165 aa7.76□□□□□ -1.17
USP49-205ENST00000448078 CLEC4GQ6UXB4 293 aa7.76□□□□□ -1.17
USP49-205ENST00000448078 PLD6Q8N2A8 252 aaKnown RBP7.76□□□□□ -1.17
USP49-205ENST00000448078 MFSD2AQ8NA29 543 aa7.76□□□□□ -1.17
USP49-205ENST00000448078 FAM13CQ8NE31 585 aa7.76□□□□□ -1.17
USP49-205ENST00000448078 NETO1Q8TDF5 533 aa7.76□□□□□ -1.17
USP49-205ENST00000448078 POLR3GLQ9BT43 218 aa7.76□□□□□ -1.17
USP49-205ENST00000448078 NCAPD2Q15021 1401 aa7.76□□□□□ -1.17
USP49-205ENST00000448078 RNF123Q5XPI4 1314 aa7.76□□□□□ -1.17
USP49-205ENST00000448078 KIAA1551Q9HCM1 1747 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 KIAA1324LA8MWY0 1029 aaPredicted RBP7.75□□□□□ -1.17
USP49-205ENST00000448078 GFRA2O00451 464 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 CELF2O95319 508 aaKnown RBP7.75□□□□□ -1.17
USP49-205ENST00000448078 CYP7A1P22680 504 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 NTF4P34130 210 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 YARSP54577 528 aaKnown RBP7.75□□□□□ -1.17
USP49-205ENST00000448078 TEFQ10587 303 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 SLC39A6Q13433 755 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 ZNF746Q6NUN9 644 aaPredicted RBP7.75□□□□□ -1.17
USP49-205ENST00000448078 MORC1Q86VD1 984 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 VSIG10LQ86VR7 867 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 DTX1Q86Y01 620 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 RNF34Q969K3 372 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 MRRFQ96E11 262 aaKnown RBP7.75□□□□□ -1.17
USP49-205ENST00000448078 TMEM87BQ96K49 555 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 RHOVQ96L33 236 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 SLC5A6Q9Y289 635 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 CORINQ9Y5Q5 1042 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 TACC3Q9Y6A5 838 aa7.75□□□□□ -1.17
USP49-205ENST00000448078 BRCA1P38398 1863 aaKnown RBP7.75□□□□□ -1.17
USP49-205ENST00000448078 ZNF831Q5JPB2 1677 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 RNMTO43148 476 aaKnown RBP7.74□□□□□ -1.17
USP49-205ENST00000448078 CILPO75339 1184 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 CBX7O95931 251 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 GP2P55259 537 aaKnown RBP7.74□□□□□ -1.17
USP49-205ENST00000448078 MPP2Q14168 576 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 PKN2Q16513 984 aaKnown RBP7.74□□□□□ -1.17
USP49-205ENST00000448078 IFI16Q16666 785 aaKnown RBP7.74□□□□□ -1.17
USP49-205ENST00000448078 LETMD1Q6P1Q0 360 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 ERMP1Q7Z2K6 904 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 USP48Q86UV5 1035 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 NIM1KQ8IY84 436 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 PHACTR4Q8IZ21 702 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 STK11IPQ8N1F8 1099 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 ZNF296Q8WUU4 475 aaPredicted RBP7.74□□□□□ -1.17
USP49-205ENST00000448078 PSMD1Q99460 953 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 ADARB2Q9NS39 739 aaKnown RBP7.74□□□□□ -1.17
USP49-205ENST00000448078 PDE4DIPQ5VU43 2346 aa7.74□□□□□ -1.17
USP49-205ENST00000448078 CEACAM5P06731 702 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 SPINK2P20155 84 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 APOBRQ0VD83 1088 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 SLBPQ14493 270 aaKnown RBP eCLIP7.73□□□□□ -1.17
USP49-205ENST00000448078 SFRP5Q5T4F7 317 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 XP32Q5T750 250 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 CST9Q5W186 159 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 SLC6A19Q695T7 634 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 CIAPIN1Q6FI81 312 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 SAPCD2Q86UD0 394 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 C2orf69Q8N8R5 385 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 SUPT20HQ8NEM7 779 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 FBXO27Q8NI29 283 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 RPGRQ92834 1020 aaKnown RBP7.73□□□□□ -1.17
USP49-205ENST00000448078 HRASLS5Q96KN8 279 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 FBXL18Q96ME1 805 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 FMNL2Q96PY5 1086 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 SPON2Q9BUD6 331 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 VPS33BQ9H267 617 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 SAGE1Q9NXZ1 904 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 TJP2Q9UDY2 1190 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 CCDC39Q9UFE4 941 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 ZNF541Q9H0D2 1346 aa7.73□□□□□ -1.17
USP49-205ENST00000448078 TMEM265A0A087WTH1 108 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 H7C1D1 291 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 SLITRK5O94991 958 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 CST3P01034 146 aaPredicted RBP7.72□□□□□ -1.17
USP49-205ENST00000448078 EPS15P42566 896 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 SOX10P56693 466 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 TNIP1Q15025 636 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 MSMPQ1L6U9 139 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 SEZ6Q53EL9 994 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 FBXL19Q6PCT2 694 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 REC114Q7Z4M0 266 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 CDH24Q86UP0 819 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 KIAA0825Q8IV33 1275 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 PSMG3-AS1Q96PY0 264 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 NYXQ9GZU5 481 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 ZNF408Q9H9D4 720 aa7.72□□□□□ -1.17
USP49-205ENST00000448078 ADAM30Q9UKF2 790 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms