RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 WDR18Q9BV38 432 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 NKX2-4Q9H2Z4 354 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 VTA1Q9NP79 307 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 NMRK2Q9NPI5 230 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 NLRC4Q9NPP4 1024 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 DDX21Q9NR30 783 aaKnown RBP eCLIP4.76□□□□□ -1.65
PMS1-216ENST00000447734 CYP26B1Q9NR63 512 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 C1orf112Q9NSG2 853 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 MKS1Q9NXB0 559 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 GTF2A1LQ9UNN4 478 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 PCDHGC5Q9Y5F6 944 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 PPP2R3BQ9Y5P8 575 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 RPS6KL1Q9Y6S9 549 aa4.76□□□□□ -1.65
PMS1-216ENST00000447734 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.75□□□□□ -1.65
PMS1-216ENST00000447734 BTBD11A6QL63 1104 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 FSCN2O14926 492 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 XPOTO43592 962 aaKnown RBP4.75□□□□□ -1.65
PMS1-216ENST00000447734 NBNO60934 754 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 AOC2O75106 756 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 RGS9O75916 674 aaPredicted RBP4.75□□□□□ -1.65
PMS1-216ENST00000447734 RBP3P10745 1247 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 COL6A1P12109 1028 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 KCNA6P17658 529 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 KPNA1P52294 538 aaPredicted RBP4.75□□□□□ -1.65
PMS1-216ENST00000447734 SESN3P58005 492 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 KRT85P78386 507 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 ID3Q02535 119 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 AUHQ13825 339 aaKnown RBP4.75□□□□□ -1.65
PMS1-216ENST00000447734 GALEQ14376 348 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 PRSS53Q2L4Q9 553 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 NOL9Q5SY16 702 aaKnown RBP4.75□□□□□ -1.65
PMS1-216ENST00000447734 IFIT1BQ5T764 474 aaKnown RBP4.75□□□□□ -1.65
PMS1-216ENST00000447734 SRLQ86TD4 932 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 FAM186BQ8IYM0 893 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 IGSF22Q8N9C0 903 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 CLRN3Q8NCR9 226 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 CHTF18Q8WVB6 975 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 TTC9Q92623 222 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 C1orf159Q96HA4 380 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 PAGR1Q9BTK6 254 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 CARD10Q9BWT7 1032 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 AS3MTQ9HBK9 375 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 NGRNQ9NPE2 291 aaKnown RBP4.75□□□□□ -1.65
PMS1-216ENST00000447734 RAD18Q9NS91 495 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 SPTLC3Q9NUV7 552 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 KLHL11Q9NVR0 708 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 C14orf119Q9NWQ9 140 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 DMTF1Q9Y222 760 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 STARD13Q9Y3M8 1113 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 SCINQ9Y6U3 715 aa4.75□□□□□ -1.65
PMS1-216ENST00000447734 A0A087WZG4 1122 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 KLRG2A4D1S0 409 aaPredicted RBP4.74□□□□□ -1.65
PMS1-216ENST00000447734 WDR64B1ANS9 1081 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 SHOXO15266 292 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 SLC26A4O43511 780 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 SCG5P05408 212 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 AFF1P51825 1210 aaKnown RBP4.74□□□□□ -1.65
PMS1-216ENST00000447734 AK2P54819 239 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 NLRP12P59046 1061 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 RNF4P78317 190 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 PPP2R5DQ14738 602 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 ODF1Q14990 250 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 GRIK4Q16099 956 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 NKG7Q16617 165 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 SLC35F1Q5T1Q4 408 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 NBPF12Q5TAG4 269 aaPredicted RBP4.74□□□□□ -1.65
PMS1-216ENST00000447734 EFCAB2Q5VUJ9 269 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 KCNT2Q6UVM3 1135 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 CDC37L1Q7L3B6 337 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 CATIPQ7Z7H3 387 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 ZC3H7AQ8IWR0 971 aaKnown RBP4.74□□□□□ -1.65
PMS1-216ENST00000447734 FAM9BQ8IZU0 186 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 KCT2Q8NC54 265 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 CHST14Q8NCH0 376 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 ACRBPQ8NEB7 543 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 SLC5A5Q92911 643 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 NOL6Q9H6R4 1146 aaKnown RBP4.74□□□□□ -1.65
PMS1-216ENST00000447734 B4GALT6Q9UBX8 382 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 ZNF69Q9UC07 566 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 FBXL21Q9UKT6 434 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 INVSQ9Y283 1065 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 PCDHA8Q9Y5H6 950 aa4.74□□□□□ -1.65
PMS1-216ENST00000447734 MORC2Q9Y6X9 1032 aaPredicted RBP4.74□□□□□ -1.65
PMS1-216ENST00000447734 ELOA3CA0A087WX78 387 aaPredicted RBP4.73□□□□□ -1.65
PMS1-216ENST00000447734 LOC100289279A0A1B0GTE1 492 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 ELOA3DA6NLF2 546 aaPredicted RBP4.73□□□□□ -1.65
PMS1-216ENST00000447734 ADARB2-AS1A8MUL3 147 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 TRAF5O00463 557 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 PIP5K1CO60331 668 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 CTNND1O60716 968 aaKnown RBP4.73□□□□□ -1.65
PMS1-216ENST00000447734 SETSIPP0DME0 302 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 ATP2A2P16615 1042 aaKnown RBP4.73□□□□□ -1.65
PMS1-216ENST00000447734 ZNF445P59923 1031 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 AMPD2Q01433 879 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 BIRC3Q13489 604 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 KRT72Q14CN4 511 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 DDB1Q16531 1140 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 LONRF1Q17RB8 773 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 NBPF9Q3BBW0 867 aa4.73□□□□□ -1.65
PMS1-216ENST00000447734 ELOA3BQ3SY89 546 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms