RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 SLC12A6Q9UHW9 1150 aa11.11□□□□□ -0.63
CASP4-203ENST00000444739 TPX2Q9ULW0 747 aaKnown RBP11.11□□□□□ -0.63
CASP4-203ENST00000444739 PLAAQ9Y263 795 aa11.11□□□□□ -0.63
CASP4-203ENST00000444739 CNTNAP5Q8WYK1 1306 aa11.11□□□□□ -0.63
CASP4-203ENST00000444739 BAZ2BQ9UIF8 2168 aaKnown RBP11.11□□□□□ -0.63
CASP4-203ENST00000444739 GMNCA6NCL1 334 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 MYL1P05976 194 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 MAGEA1P43355 309 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 BYSLQ13895 437 aaKnown RBP11.1□□□□□ -0.63
CASP4-203ENST00000444739 CRYMQ14894 314 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 TRADDQ15628 312 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 QPCTQ16769 361 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 ANKRD40Q6AI12 368 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 CEP57Q86XR8 500 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 FAM114A1Q8IWE2 563 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 TEX11Q8IYF3 940 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 ARFGAP2Q8N6H7 521 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 CARD10Q9BWT7 1032 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 PLCB1Q9NQ66 1216 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 HAUS2Q9NVX0 235 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 KBTBD4Q9NVX7 518 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
CASP4-203ENST00000444739 TSKSQ9UJT2 592 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 SIK3Q9Y2K2 1263 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 DUOX1Q9NRD9 1551 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 ADAMTSL3P82987 1691 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 C5orf60A6NFR6 353 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 TRAPPC3O43617 180 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 AKR1B10O60218 316 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 HPDP32754 393 aaPredicted RBP11.1□□□□□ -0.63
CASP4-203ENST00000444739 TROAPQ12815 778 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 RASGRF1Q13972 1273 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 CDC37Q16543 378 aaPredicted RBP11.1□□□□□ -0.63
CASP4-203ENST00000444739 ASTE1Q2TB18 679 aaPredicted RBP11.1□□□□□ -0.63
CASP4-203ENST00000444739 LRIG3Q6UXM1 1119 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 TMTC3Q6ZXV5 915 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 MAATS1Q7Z4T9 603 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 ANKRD13CQ8N6S4 541 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 LRRC15Q8TF66 581 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 ESR2Q92731 530 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 NOX5Q96PH1 765 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 ATP6V0A4Q9HBG4 840 aa11.1□□□□□ -0.63
CASP4-203ENST00000444739 BICDL2A1A5D9 508 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 ANKRD18BA2A2Z9 1011 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 H0YGN5 161 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 SMIM22K7EJ46 135 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 SSBP05455 408 aaKnown RBP eCLIP11.09□□□□□ -0.63
CASP4-203ENST00000444739 MYBP10242 640 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 FGFR2P21802 821 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 PAX7P23759 505 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 SCTRP47872 440 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 XRCC4Q13426 336 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 LACTB2Q53H82 288 aaPredicted RBP11.09□□□□□ -0.63
CASP4-203ENST00000444739 CATIPQ7Z7H3 387 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 RNF10Q8N5U6 811 aaKnown RBP11.09□□□□□ -0.63
CASP4-203ENST00000444739 TBC1D22AQ8WUA7 517 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 LPIN2Q92539 896 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 ZSCAN10Q96SZ4 725 aaPredicted RBP11.09□□□□□ -0.63
CASP4-203ENST00000444739 KRT12Q99456 494 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 ANAPC4Q9UJX5 808 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 NFS1Q9Y697 457 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 GRID2IPA4D2P6 1211 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 PP2D1A8MPX8 630 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 BUB1O43683 1085 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 RTN2O75298 545 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 EZRP15311 586 aaKnown RBP11.09□□□□□ -0.63
CASP4-203ENST00000444739 IBSPP21815 317 aaPredicted RBP11.09□□□□□ -0.63
CASP4-203ENST00000444739 NLRP5P59047 1200 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 RASSF7Q02833 373 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 KRT28Q7Z3Y7 464 aa11.09□□□□□ -0.63
CASP4-203ENST00000444739 SRBD1Q8N5C6 995 aaKnown RBP11.09□□□□□ -0.63
CASP4-203ENST00000444739 INPP4AQ96PE3 977 aaPredicted RBP11.09□□□□□ -0.63
CASP4-203ENST00000444739 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.09□□□□□ -0.63
CASP4-203ENST00000444739 LRP5O75197 1615 aa11.08□□□□□ -0.63
CASP4-203ENST00000444739 RREB1Q92766 1687 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 KIF13AQ9H1H9 1805 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 GOLGA6L10A6NI86 522 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 LRRC53A6NM62 1247 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 PPP1R12AO14974 1030 aaPredicted RBP11.08□□□□□ -0.64
CASP4-203ENST00000444739 MGRN1O60291 552 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 PAEPP09466 180 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 SLC8A1P32418 973 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 SLC1A4P43007 532 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 CTSWP56202 376 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 IFFO1Q0D2I5 559 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 PPP2R5AQ15172 486 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 PUM3Q15397 648 aaKnown RBP11.08□□□□□ -0.64
CASP4-203ENST00000444739 UAP1Q16222 522 aaPredicted RBP11.08□□□□□ -0.64
CASP4-203ENST00000444739 IFIT1BQ5T764 474 aaKnown RBP11.08□□□□□ -0.64
CASP4-203ENST00000444739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.08□□□□□ -0.64
CASP4-203ENST00000444739 SEC16BQ96JE7 1060 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 SCLT1Q96NL6 688 aa11.08□□□□□ -0.64
CASP4-203ENST00000444739 FAM207AQ9NSI2 230 aaPredicted RBP11.08□□□□□ -0.64
CASP4-203ENST00000444739 MINDY4BA8MYZ0 360 aa11.07□□□□□ -0.64
CASP4-203ENST00000444739 GCOM1H8Y6P7 765 aaPredicted RBP11.07□□□□□ -0.64
CASP4-203ENST00000444739 OPLAHO14841 1288 aa11.07□□□□□ -0.64
CASP4-203ENST00000444739 RAD51CO43502 376 aa11.07□□□□□ -0.64
CASP4-203ENST00000444739 MYZAPP0CAP1 466 aa11.07□□□□□ -0.64
CASP4-203ENST00000444739 CALM1P0DP23 149 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms