RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 TMED8Q6PL24 325 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 RBM43Q6ZSC3 357 aaKnown RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 GOLGA5Q8TBA6 731 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 RIOK1Q9BRS2 568 aaKnown RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 DDX25Q9UHL0 483 aaKnown RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 ABT1Q9ULW3 272 aaKnown RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 SALL1Q9NSC2 1324 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 TEX33O43247 280 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 TUBB4AP04350 444 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 FMR1Q06787 632 aaKnown RBP eCLIP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 DDR1Q08345 913 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 FAM83BQ5T0W9 1011 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 KRT26Q7Z3Y9 468 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 SRLQ86TD4 932 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 MYCT1Q8N699 235 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 PSMD14O00487 310 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 FOXP2O15409 715 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 TRAPPC10P48553 1259 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 CDC37Q16543 378 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 TAF4BQ92750 862 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 GOLGA1Q92805 767 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 BEGAINQ9BUH8 593 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 FAM207AQ9NSI2 230 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 PLEKHG2Q9H7P9 1386 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 SOWAHDA6NJG2 315 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 TMCO5BA8MYB1 307 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 SRGNP10124 158 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 EIF2AK2P19525 551 aaKnown RBP11.71□□□□□ -0.53
TOP3B-210ENST00000444502 CA8P35219 290 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 TOB1P50616 345 aaPredicted RBP11.71□□□□□ -0.53
TOP3B-210ENST00000444502 COPB1P53618 953 aaKnown RBP11.71□□□□□ -0.53
TOP3B-210ENST00000444502 C12orf60Q5U649 245 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 TMEM179Q6ZVK1 233 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 AZI2Q9H6S1 392 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 RIC1Q4ADV7 1423 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 TROAPQ12815 778 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 KIF5AQ12840 1032 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 CNNM4Q6P4Q7 775 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 MLXIPQ9HAP2 919 aa11.71□□□□□ -0.53
TOP3B-210ENST00000444502 FRMD3A2A2Y4 597 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 USP17L15C9J2P7 530 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 USP17L13C9JLJ4 530 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 USP17L11C9JVI0 530 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 USP17L18D6R9N7 530 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 USP17L22D6RA61 530 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 USP17L17D6RBQ6 530 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 USP17L19D6RCP7 530 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 USP17L20D6RJB6 530 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 EVX2Q03828 476 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 USP17L24Q0WX57 530 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 PRPF4BQ13523 1007 aaKnown RBP11.71□□□□□ -0.54
TOP3B-210ENST00000444502 RAPGEF1Q13905 1077 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 USP17L6PQ6QN14 398 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 CYP26C1Q6V0L0 522 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 SLC10A4Q96EP9 437 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 NAP1L4Q99733 375 aaKnown RBP11.71□□□□□ -0.54
TOP3B-210ENST00000444502 SUGCTQ9HAC7 445 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 TRIM49BA6NDI0 452 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 F5H6K3 240 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 KRT86O43790 486 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 GCNT3O95395 438 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.54
TOP3B-210ENST00000444502 KLRC3Q07444 240 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 STRIP1Q5VSL9 837 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 MIER3Q7Z3K6 550 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 TMTC1Q8IUR5 882 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 OTUD5Q96G74 571 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 MTA3Q9BTC8 594 aa11.71□□□□□ -0.54
TOP3B-210ENST00000444502 EIF3CLB5ME19 914 aaKnown RBP11.7□□□□□ -0.54
TOP3B-210ENST00000444502 USP17L10C9JJH3 530 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 STX10O60499 249 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 CHRM1P11229 460 aaPredicted RBP11.7□□□□□ -0.54
TOP3B-210ENST00000444502 SYDE2Q5VT97 1194 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 PSMB7Q99436 277 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 EIF3CQ99613 913 aaKnown RBP11.7□□□□□ -0.54
TOP3B-210ENST00000444502 OSBPL5Q9H0X9 879 aaPredicted RBP11.7□□□□□ -0.54
TOP3B-210ENST00000444502 KIF1AQ12756 1690 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 ORC4O43929 436 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 PAFAH1B1P43034 410 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 CCZ1BP86790 482 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 CCZ1P86791 482 aaPredicted RBP11.7□□□□□ -0.54
TOP3B-210ENST00000444502 BIRC3Q13489 604 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 LRRC41Q15345 812 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 FAM47CQ5HY64 1035 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 CDC42EP5Q6NZY7 148 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 PHF20Q9BVI0 1012 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 NLRC4Q9NPP4 1024 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 FLT1P17948 1338 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 PLCG1P19174 1290 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 ACTN2P35609 894 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 KRT83P78385 493 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 CEP57Q86XR8 500 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 METTL13Q8N6R0 699 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
TOP3B-210ENST00000444502 TMEM39BQ9GZU3 492 aa11.7□□□□□ -0.54
TOP3B-210ENST00000444502 MRPL44Q9H9J2 332 aaKnown RBP11.7□□□□□ -0.54
TOP3B-210ENST00000444502 TUBE1Q9UJT0 475 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms