RNA–Protein interactions for RNA: ENST00000443768.1

AC005539.1-201, humanhuman

BASIC

Gene AC005539.1, Length 1,479 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005539.1-201ENST00000443768 SNX17Q15036 470 aa6.21□□□□□ -1.42
AC005539.1-201ENST00000443768 EGFLAMQ63HQ2 1017 aa6.21□□□□□ -1.42
AC005539.1-201ENST00000443768 C16orf86Q6ZW13 317 aa6.21□□□□□ -1.42
AC005539.1-201ENST00000443768 NLRP10Q86W26 655 aa6.21□□□□□ -1.42
AC005539.1-201ENST00000443768 HOMER1Q86YM7 354 aa6.21□□□□□ -1.42
AC005539.1-201ENST00000443768 PLEKHO2Q8TD55 490 aa6.21□□□□□ -1.42
AC005539.1-201ENST00000443768 PHF20Q9BVI0 1012 aa6.21□□□□□ -1.42
AC005539.1-201ENST00000443768 MRPL4Q9BYD3 311 aaKnown RBP6.21□□□□□ -1.42
AC005539.1-201ENST00000443768 SLC52A2Q9HAB3 445 aa6.21□□□□□ -1.42
AC005539.1-201ENST00000443768 TRIM39Q9HCM9 518 aa6.21□□□□□ -1.42
AC005539.1-201ENST00000443768 CARMIL2Q6F5E8 1435 aa6.2□□□□□ -1.42
AC005539.1-201ENST00000443768 PLD2O14939 933 aa6.2□□□□□ -1.42
AC005539.1-201ENST00000443768 RFPL3O75679 317 aa6.2□□□□□ -1.42
AC005539.1-201ENST00000443768 ASMTLO95671 621 aa6.2□□□□□ -1.42
AC005539.1-201ENST00000443768 GALNT18Q6P9A2 607 aa6.2□□□□□ -1.42
AC005539.1-201ENST00000443768 ABHD4Q8TB40 342 aa6.2□□□□□ -1.42
AC005539.1-201ENST00000443768 SCLYQ96I15 445 aa6.2□□□□□ -1.42
AC005539.1-201ENST00000443768 ZFYVE21Q9BQ24 234 aa6.2□□□□□ -1.42
AC005539.1-201ENST00000443768 RNF32Q9H0A6 362 aa6.2□□□□□ -1.42
AC005539.1-201ENST00000443768 CRTAC1Q9NQ79 661 aa6.2□□□□□ -1.42
AC005539.1-201ENST00000443768 GULP1Q9UBP9 304 aa6.2□□□□□ -1.42
AC005539.1-201ENST00000443768 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 RAPGEF3O95398 923 aa6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 PRKCAP17252 672 aa6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 HSD3B2P26439 372 aa6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 SLC14A2Q15849 920 aa6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 FNDC3BQ53EP0 1204 aaKnown RBP6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 LBX2Q6XYB7 198 aa6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 MAMDC2Q7Z304 686 aaPredicted RBP6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 SYNPOQ8N3V7 929 aa6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 KIRREL1Q96J84 757 aa6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 IPO9Q96P70 1041 aaKnown RBP6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 TIMM13Q9Y5L4 95 aaPredicted RBP6.19□□□□□ -1.42
AC005539.1-201ENST00000443768 FAM83GA6ND36 823 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 ZNF503-AS2A6NEH8 195 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 CDC45O75419 566 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 RAC2P15153 192 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 PNLIPP16233 465 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 BCL6P41182 706 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 GPR85P60893 370 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 TCEA2Q15560 299 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 JAMLQ86YT9 394 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 NUP43Q8NFH3 380 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 PDLIM7Q9NR12 457 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 PPARGC1AQ9UBK2 798 aaKnown RBP6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 GPR160Q9UJ42 338 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 YBX2Q9Y2T7 364 aaKnown RBP6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 PCDHA2Q9Y5H9 948 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 CD2APQ9Y5K6 639 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 TAF6LQ9Y6J9 622 aa6.18□□□□□ -1.42
AC005539.1-201ENST00000443768 NPHS1O60500 1241 aa6.17□□□□□ -1.42
AC005539.1-201ENST00000443768 KCNA6P17658 529 aa6.17□□□□□ -1.42
AC005539.1-201ENST00000443768 PABPC4Q13310 644 aaKnown RBP eCLIP6.17□□□□□ -1.42
AC005539.1-201ENST00000443768 DALRD3Q5D0E6 543 aaKnown RBP6.17□□□□□ -1.42
AC005539.1-201ENST00000443768 FGD2Q7Z6J4 655 aa6.17□□□□□ -1.42
AC005539.1-201ENST00000443768 IFNL3Q8IZI9 196 aa6.17□□□□□ -1.42
AC005539.1-201ENST00000443768 TNFRSF12AQ9NP84 129 aa6.17□□□□□ -1.42
AC005539.1-201ENST00000443768 RWDD3Q9Y3V2 267 aa6.17□□□□□ -1.42
AC005539.1-201ENST00000443768 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
AC005539.1-201ENST00000443768 X6R8D5 127 aa6.17□□□□□ -1.42
AC005539.1-201ENST00000443768 ARVCFO00192 962 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 GLI1P08151 1106 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 GLI4P10075 376 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 ERVFRD-1P60508 538 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 CYP4F8P98187 520 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 LSAMPQ13449 338 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 BRAPQ7Z569 592 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 TEX2Q8IWB9 1127 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 SIRT2Q8IXJ6 389 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 FEZ1Q99689 392 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 SFMBT1Q9UHJ3 866 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 PCDHA8Q9Y5H6 950 aa6.16□□□□□ -1.42
AC005539.1-201ENST00000443768 AQP7O14520 342 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 WNT9AO14904 365 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 EFCAB14O75071 495 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 CRTAMO95727 393 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 SDSP20132 328 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 FPR2P25090 351 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 GTF2A2P52657 109 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 RPL11P62913 178 aaKnown RBP6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 CEP68Q76N32 757 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 ZSWIM9Q86XI8 627 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 NINJ1Q92982 152 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 INTS4Q96HW7 963 aaKnown RBP6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 MARCH2Q9P0N8 246 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 NDOR1Q9UHB4 597 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 PCDHA9Q9Y5H5 950 aa6.15□□□□□ -1.42
AC005539.1-201ENST00000443768 H7BY64 318 aa6.15□□□□□ -1.43
AC005539.1-201ENST00000443768 SRGAP3O43295 1099 aa6.15□□□□□ -1.43
AC005539.1-201ENST00000443768 DNAJC8O75937 253 aaPredicted RBP6.15□□□□□ -1.43
AC005539.1-201ENST00000443768 RASGRP1O95267 797 aa6.15□□□□□ -1.43
AC005539.1-201ENST00000443768 JUNBP17275 347 aaPredicted RBP6.15□□□□□ -1.43
AC005539.1-201ENST00000443768 TACR1P25103 407 aa6.15□□□□□ -1.43
AC005539.1-201ENST00000443768 C21orf62-AS1Q17RA5 79 aa6.15□□□□□ -1.43
AC005539.1-201ENST00000443768 LZTR1Q8N653 840 aa6.15□□□□□ -1.43
AC005539.1-201ENST00000443768 PCDH19Q8TAB3 1148 aa6.15□□□□□ -1.43
AC005539.1-201ENST00000443768 TCRBV16S1A1N1A0A5B0 115 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms