RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 SH3RF1Q7Z6J0 888 aa25.65■■□□□ 1.7
HDLBP-220ENST00000442730 SCFD2Q8WU76 684 aa25.65■■□□□ 1.7
HDLBP-220ENST00000442730 SLC12A7Q9Y666 1083 aa25.65■■□□□ 1.7
HDLBP-220ENST00000442730 BAZ2BQ9UIF8 2168 aaKnown RBP25.65■■□□□ 1.7
HDLBP-220ENST00000442730 TRIM43BA6NCK2 446 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 CLTBP09497 229 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 CALM1P0DP23 149 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 CALM2P0DP24 149 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 CALM3P0DP25 149 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 SMARCA1P28370 1054 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 EXOSC10Q01780 885 aaKnown RBP25.64■■□□□ 1.7
HDLBP-220ENST00000442730 KRT32Q14532 448 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 PPP2R5BQ15173 497 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 PIBF1Q8WXW3 757 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 KCNB2Q92953 911 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 TRIM43Q96BQ3 446 aaPredicted RBP25.64■■□□□ 1.7
HDLBP-220ENST00000442730 IWS1Q96ST2 819 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 LZTS2Q9BRK4 669 aa25.64■■□□□ 1.7
HDLBP-220ENST00000442730 UBE2OQ9C0C9 1292 aaKnown RBP25.64■■□□□ 1.7
HDLBP-220ENST00000442730 A0A0U1RQG5 324 aaPredicted RBP25.63■■□□□ 1.69
HDLBP-220ENST00000442730 EIF2AK2P19525 551 aaKnown RBP25.63■■□□□ 1.69
HDLBP-220ENST00000442730 HOXA13P31271 388 aaPredicted RBP25.63■■□□□ 1.69
HDLBP-220ENST00000442730 CXCL17Q6UXB2 119 aa25.63■■□□□ 1.69
HDLBP-220ENST00000442730 DHX32Q7L7V1 743 aaKnown RBP25.63■■□□□ 1.69
HDLBP-220ENST00000442730 RAB11FIP4Q86YS3 637 aa25.63■■□□□ 1.69
HDLBP-220ENST00000442730 TCEANC2Q96MN5 208 aa25.63■■□□□ 1.69
HDLBP-220ENST00000442730 TOX2Q96NM4 488 aa25.63■■□□□ 1.69
HDLBP-220ENST00000442730 LBHD1Q9BQE6 289 aaPredicted RBP25.63■■□□□ 1.69
HDLBP-220ENST00000442730 PXMP2Q9NR77 195 aa25.63■■□□□ 1.69
HDLBP-220ENST00000442730 MAP3K20Q9NYL2 800 aaKnown RBP25.63■■□□□ 1.69
HDLBP-220ENST00000442730 SZT2Q5T011 3432 aa25.63■■□□□ 1.69
HDLBP-220ENST00000442730 GNAQP50148 359 aa25.62■■□□□ 1.69
HDLBP-220ENST00000442730 ARHGEF16Q5VV41 709 aa25.62■■□□□ 1.69
HDLBP-220ENST00000442730 MICU3Q86XE3 530 aa25.62■■□□□ 1.69
HDLBP-220ENST00000442730 SRBD1Q8N5C6 995 aaKnown RBP25.62■■□□□ 1.69
HDLBP-220ENST00000442730 SAMD3Q8N6K7 520 aa25.62■■□□□ 1.69
HDLBP-220ENST00000442730 RRP36Q96EU6 259 aaKnown RBP25.62■■□□□ 1.69
HDLBP-220ENST00000442730 NKRFO15226 690 aaKnown RBP eCLIP25.61■■□□□ 1.69
HDLBP-220ENST00000442730 ZEB2O60315 1214 aa25.61■■□□□ 1.69
HDLBP-220ENST00000442730 CABYRO75952 493 aa25.61■■□□□ 1.69
HDLBP-220ENST00000442730 ARIH2O95376 493 aa25.61■■□□□ 1.69
HDLBP-220ENST00000442730 HSPA4P34932 840 aa25.61■■□□□ 1.69
HDLBP-220ENST00000442730 CDK7P50613 346 aa25.61■■□□□ 1.69
HDLBP-220ENST00000442730 FAAP100Q0VG06 881 aa25.61■■□□□ 1.69
HDLBP-220ENST00000442730 STXBP2Q15833 593 aa25.61■■□□□ 1.69
HDLBP-220ENST00000442730 TDHQ8IZJ6 230 aa25.61■■□□□ 1.69
HDLBP-220ENST00000442730 CMTR1Q8N1G2 835 aaKnown RBP25.61■■□□□ 1.69
HDLBP-220ENST00000442730 MROH7Q68CQ1 1323 aa25.61■■□□□ 1.69
HDLBP-220ENST00000442730 GCOM1H8Y6P7 765 aaPredicted RBP25.6■■□□□ 1.69
HDLBP-220ENST00000442730 ARVCFO00192 962 aa25.6■■□□□ 1.69
HDLBP-220ENST00000442730 KIAA0355O15063 1070 aa25.6■■□□□ 1.69
HDLBP-220ENST00000442730 REC8O95072 547 aa25.6■■□□□ 1.69
HDLBP-220ENST00000442730 POLR2MP0CAP2 368 aa25.6■■□□□ 1.69
HDLBP-220ENST00000442730 TXNP10599 105 aaKnown RBP25.6■■□□□ 1.69
HDLBP-220ENST00000442730 TTLL4Q14679 1199 aa25.6■■□□□ 1.69
HDLBP-220ENST00000442730 APOA5Q6Q788 366 aa25.6■■□□□ 1.69
HDLBP-220ENST00000442730 TMTC3Q6ZXV5 915 aa25.6■■□□□ 1.69
HDLBP-220ENST00000442730 FANCBQ8NB91 859 aa25.6■■□□□ 1.69
HDLBP-220ENST00000442730 OR6J1Q8NGC5 347 aa25.6■■□□□ 1.69
HDLBP-220ENST00000442730 VTI1AQ96AJ9 217 aa25.6■■□□□ 1.69
HDLBP-220ENST00000442730 DCDC2CA8MYV0 355 aa25.59■■□□□ 1.69
HDLBP-220ENST00000442730 NR3C2P08235 984 aa25.59■■□□□ 1.69
HDLBP-220ENST00000442730 HMGB1P09429 215 aaKnown RBP25.59■■□□□ 1.69
HDLBP-220ENST00000442730 ITGB8P26012 769 aa25.59■■□□□ 1.69
HDLBP-220ENST00000442730 CPT1AP50416 773 aa25.59■■□□□ 1.69
HDLBP-220ENST00000442730 CCDC62Q6P9F0 684 aa25.59■■□□□ 1.69
HDLBP-220ENST00000442730 COPS5Q92905 334 aa25.59■■□□□ 1.69
HDLBP-220ENST00000442730 PDCD2LQ9BRP1 358 aa25.59■■□□□ 1.69
HDLBP-220ENST00000442730 SEC63Q9UGP8 760 aaKnown RBP25.59■■□□□ 1.69
HDLBP-220ENST00000442730 BRPF3Q9ULD4 1205 aa25.59■■□□□ 1.69
HDLBP-220ENST00000442730 SNX14Q9Y5W7 946 aa25.59■■□□□ 1.69
HDLBP-220ENST00000442730 SOX1O00570 391 aaPredicted RBP25.58■■□□□ 1.69
HDLBP-220ENST00000442730 SEPT14Q6ZU15 432 aa25.58■■□□□ 1.69
HDLBP-220ENST00000442730 SLC43A3Q8NBI5 491 aa25.58■■□□□ 1.69
HDLBP-220ENST00000442730 BADQ92934 168 aa25.58■■□□□ 1.69
HDLBP-220ENST00000442730 TMEM39AQ9NV64 488 aa25.58■■□□□ 1.69
HDLBP-220ENST00000442730 TBX21Q9UL17 535 aa25.58■■□□□ 1.69
HDLBP-220ENST00000442730 GRIN2DO15399 1336 aa25.58■■□□□ 1.69
HDLBP-220ENST00000442730 EIF3JO75822 258 aaKnown RBP25.57■■□□□ 1.68
HDLBP-220ENST00000442730 FAM126BQ8IXS8 530 aa25.57■■□□□ 1.68
HDLBP-220ENST00000442730 IL31RAQ8NI17 732 aa25.57■■□□□ 1.68
HDLBP-220ENST00000442730 JAKMIP1Q96N16 626 aaKnown RBP25.57■■□□□ 1.68
HDLBP-220ENST00000442730 CPA1P15085 419 aa25.56■■□□□ 1.68
HDLBP-220ENST00000442730 PSMC6P62333 389 aa25.56■■□□□ 1.68
HDLBP-220ENST00000442730 PURAQ00577 322 aaKnown RBP25.56■■□□□ 1.68
HDLBP-220ENST00000442730 PGM5Q15124 567 aa25.56■■□□□ 1.68
HDLBP-220ENST00000442730 SYNE3Q6ZMZ3 975 aa25.56■■□□□ 1.68
HDLBP-220ENST00000442730 FCHSD1Q86WN1 690 aa25.56■■□□□ 1.68
HDLBP-220ENST00000442730 POLR3EQ9NVU0 708 aa25.56■■□□□ 1.68
HDLBP-220ENST00000442730 FRMPD4Q14CM0 1322 aa25.56■■□□□ 1.68
HDLBP-220ENST00000442730 KIAA1217Q5T5P2 1943 aa25.55■■□□□ 1.68
HDLBP-220ENST00000442730 A6NJR5 290 aa25.55■■□□□ 1.68
HDLBP-220ENST00000442730 ITGA7Q13683 1181 aa25.55■■□□□ 1.68
HDLBP-220ENST00000442730 KLF18A0A0U1RQI7 1052 aa25.54■■□□□ 1.68
HDLBP-220ENST00000442730 hCG_1642624A0A1W2PR95 340 aa25.54■■□□□ 1.68
HDLBP-220ENST00000442730 ZBTB43O43298 467 aa25.54■■□□□ 1.68
HDLBP-220ENST00000442730 RGS20O76081 388 aa25.54■■□□□ 1.68
HDLBP-220ENST00000442730 MYL3P08590 195 aa25.54■■□□□ 1.68
HDLBP-220ENST00000442730 MYCLP12524 364 aaPredicted RBP25.54■■□□□ 1.68
HDLBP-220ENST00000442730 ARHGAP1Q07960 439 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms