RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 ASIC1P78348 528 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 GOLGA8FQ08AF8 430 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 GOLGA8DPQ0D2H9 430 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 NFIAQ12857 509 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 CERKLQ49MI3 558 aaPredicted RBP9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 ZNF784Q8NCA9 323 aaPredicted RBP9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 UBE2Q2Q8WVN8 375 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 TRIM47Q96LD4 638 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 EDEM3Q9BZQ6 932 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 TTYH3Q9C0H2 523 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 PSTPIP2Q9H939 334 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 KCNMB3Q9NPA1 279 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 GPCPD1Q9NPB8 672 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 TMEM260Q9NX78 707 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 TAB2Q9NYJ8 693 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 OGFRQ9NZT2 677 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 MRFAP1Q9Y605 127 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 MYH7BA7E2Y1 1941 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 F8W031 263 aaPredicted RBP9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 FANCGO15287 622 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 ATP8B1O43520 1251 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 SLC37A4O43826 429 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 HNRNPH3P31942 346 aaKnown RBP9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 TXKP42681 527 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 SCNN1DP51172 638 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 PMS1P54277 932 aaKnown RBP9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 UBXN1Q04323 297 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 SLFN13Q68D06 897 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 SLFN12Q8IYM2 578 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 CSGALNACT2Q8N6G5 542 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 HAS1Q92839 578 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 VPS16Q9H269 839 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 DDX25Q9UHL0 483 aaKnown RBP9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 HERC5Q9UII4 1024 aaKnown RBP9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 DDX41Q9UJV9 622 aaKnown RBP9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 MTMR7Q9Y216 660 aa9.17□□□□□ -0.94
SPIRE1-204ENST00000440472 MYMKA6NI61 221 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 SOWAHDA6NJG2 315 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 USP17L10C9JJH3 530 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 KIF5CO60282 957 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 PLA2G6O60733 806 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 TDP2O95551 362 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 EEF2P13639 858 aaKnown RBP9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 CIITAP33076 1130 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 KRT9P35527 623 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 CCT6AP40227 531 aaKnown RBP9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 GNG11P61952 73 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 STK4Q13043 487 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 CCDC96Q2M329 555 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 QRICH1Q2TAL8 776 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 Q4G0T1 1027 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 FKBP1CQ5VVH2 108 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 SH3BP5LQ7L8J4 393 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 SIAH1Q8IUQ4 282 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 CCDC170Q8IYT3 715 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 KIAA0895Q8NCT3 520 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 CDK5RAP3Q96JB5 506 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 TUBGCP2Q9BSJ2 902 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 MXD3Q9BW11 206 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 LUC7L2Q9Y383 392 aaKnown RBP9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 PITPNM2Q9BZ72 1349 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 DDTLA6NHG4 134 aaPredicted RBP9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 PIK3CDO00329 1044 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 CYP3A4P08684 503 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 SLC1A4P43007 532 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 ERVK-24P63145 666 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 ZBED6P86452 979 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 ANKRD40Q6AI12 368 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 TTBK2Q6IQ55 1244 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 RSRC2Q7L4I2 434 aaKnown RBP9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 ZFPM1Q8IX07 1006 aa9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 ZC3H3Q8IXZ2 948 aaKnown RBP9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 ZNF622Q969S3 477 aaKnown RBP eCLIP9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 MRPL44Q9H9J2 332 aaKnown RBP9.16□□□□□ -0.94
SPIRE1-204ENST00000440472 FRMD3A2A2Y4 597 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 TRIM49BA6NDI0 452 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 URI1O94763 535 aaPredicted RBP9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 KIF20AO95235 890 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 TNNI2P48788 182 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 MARSP56192 900 aaKnown RBP9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 TSR1Q2NL82 804 aaKnown RBP9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 SMAP1Q8IYB5 467 aaPredicted RBP9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 GPR161Q8N6U8 529 aaKnown RBP9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 MTMR14Q8NCE2 650 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 SNX29Q8TEQ0 813 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 DNAJC19Q96DA6 116 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 CNOT6LQ96LI5 555 aaKnown RBP9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 FAM20AQ96MK3 541 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 CEP63Q96MT8 703 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 WDR24Q96S15 920 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 NUP88Q99567 741 aaPredicted RBP9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 AMNQ9BXJ7 453 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 SEMA6BQ9H3T3 888 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 DBNDD1Q9H9R9 158 aa9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 EPN1Q9Y6I3 576 aaPredicted RBP9.15□□□□□ -0.94
SPIRE1-204ENST00000440472 TTC26A0AVF1 554 aa9.14□□□□□ -0.95
SPIRE1-204ENST00000440472 MPHOSPH10O00566 681 aaKnown RBP9.14□□□□□ -0.95
SPIRE1-204ENST00000440472 MEIS2O14770 477 aa9.14□□□□□ -0.95
SPIRE1-204ENST00000440472 TBC1D12O60347 775 aa9.14□□□□□ -0.95
SPIRE1-204ENST00000440472 GNA14O95837 355 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms