RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 TLR3O15455 904 aaKnown RBP13.9□□□□□ -0.18
PDGFB-203ENST00000440375 CYTH3O43739 400 aa13.9□□□□□ -0.18
PDGFB-203ENST00000440375 MYL3P08590 195 aa13.9□□□□□ -0.18
PDGFB-203ENST00000440375 ACRP10323 421 aa13.9□□□□□ -0.18
PDGFB-203ENST00000440375 EIF2AK2P19525 551 aaKnown RBP13.9□□□□□ -0.18
PDGFB-203ENST00000440375 SMAD3P84022 425 aaKnown RBP13.9□□□□□ -0.18
PDGFB-203ENST00000440375 ZNF697Q5TEC3 545 aa13.9□□□□□ -0.18
PDGFB-203ENST00000440375 HOMER1Q86YM7 354 aa13.9□□□□□ -0.18
PDGFB-203ENST00000440375 NCOA7Q8NI08 942 aa13.9□□□□□ -0.18
PDGFB-203ENST00000440375 LSG1Q9H089 658 aaKnown RBP13.9□□□□□ -0.18
PDGFB-203ENST00000440375 TTYH1Q9H313 450 aaPredicted RBP13.9□□□□□ -0.18
PDGFB-203ENST00000440375 HIPK3Q9H422 1215 aa13.9□□□□□ -0.18
PDGFB-203ENST00000440375 MRPL11Q9Y3B7 192 aaKnown RBP13.9□□□□□ -0.18
PDGFB-203ENST00000440375 CHD9Q3L8U1 2897 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 PRUNE2Q8WUY3 3088 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 ZBTB5O15062 677 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 CFBP00751 764 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 TXNP10599 105 aaKnown RBP13.89□□□□□ -0.19
PDGFB-203ENST00000440375 CPT1AP50416 773 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 HSD17B4P51659 736 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 TROAPQ12815 778 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 PPIGQ13427 754 aaKnown RBP eCLIP13.89□□□□□ -0.199e-9■■■■■ 34
PDGFB-203ENST00000440375 WTAPQ15007 396 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 TMEM67Q5HYA8 995 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 TMEM240Q5SV17 173 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 CCDC62Q6P9F0 684 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 SEPT14Q6ZU15 432 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 MCF2L2Q86YR7 1114 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 NSUN6Q8TEA1 469 aaKnown RBP13.89□□□□□ -0.19
PDGFB-203ENST00000440375 PIGSQ96S52 555 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 RMDN3Q96TC7 470 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 MPHOSPH6Q99547 160 aaKnown RBP13.89□□□□□ -0.19
PDGFB-203ENST00000440375 MYL10Q9BUA6 226 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 NOC4LQ9BVI4 516 aaKnown RBP13.89□□□□□ -0.19
PDGFB-203ENST00000440375 AMNQ9BXJ7 453 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 WNT8AQ9H1J5 351 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
PDGFB-203ENST00000440375 TRMT13Q9NUP7 481 aaKnown RBP13.89□□□□□ -0.19
PDGFB-203ENST00000440375 POLR3EQ9NVU0 708 aa13.89□□□□□ -0.19
PDGFB-203ENST00000440375 MYH6P13533 1939 aa13.88□□□□□ -0.19
PDGFB-203ENST00000440375 NKRFO15226 690 aaKnown RBP eCLIP13.88□□□□□ -0.19
PDGFB-203ENST00000440375 HOXA13P31271 388 aaPredicted RBP13.88□□□□□ -0.19
PDGFB-203ENST00000440375 CCL23P55773 120 aa13.88□□□□□ -0.19
PDGFB-203ENST00000440375 GHRHRQ02643 423 aa13.88□□□□□ -0.19
PDGFB-203ENST00000440375 TTLL4Q14679 1199 aa13.88□□□□□ -0.19
PDGFB-203ENST00000440375 LY6KQ17RY6 165 aa13.88□□□□□ -0.19
PDGFB-203ENST00000440375 IL31RAQ8NI17 732 aa13.88□□□□□ -0.19
PDGFB-203ENST00000440375 IGDCC4Q8TDY8 1250 aa13.88□□□□□ -0.19
PDGFB-203ENST00000440375 ESYT1Q9BSJ8 1104 aa13.88□□□□□ -0.19
PDGFB-203ENST00000440375 MTG1Q9BT17 334 aaPredicted RBP13.88□□□□□ -0.19
PDGFB-203ENST00000440375 LY9Q9HBG7 655 aa13.88□□□□□ -0.19
PDGFB-203ENST00000440375 PXMP2Q9NR77 195 aa13.88□□□□□ -0.19
PDGFB-203ENST00000440375 PCDHA1Q9Y5I3 950 aa13.88□□□□□ -0.19
PDGFB-203ENST00000440375 SCN10AQ9Y5Y9 1956 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 ERICH2A1L162 156 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 A6NJR5 290 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 CYP2C9P11712 490 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 NBPF20Q3BBV1 942 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 RASIP1Q5U651 963 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 ARHGEF16Q5VV41 709 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 ZNF365Q70YC5 407 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 TMEM199Q8N511 208 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 AFG1LQ8WV93 481 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 PIBF1Q8WXW3 757 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 VWCEQ96DN2 955 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 MAF1Q9H063 256 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 SEMA6BQ9H3T3 888 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 RIOX1Q9H6W3 641 aa13.87□□□□□ -0.19
PDGFB-203ENST00000440375 GRXCR1A8MXD5 290 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 B4DLN1 442 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 SLC27A2O14975 620 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 PRC1O43663 620 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 NR3C2P08235 984 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 DNAJB2P25686 324 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
PDGFB-203ENST00000440375 SART3Q15020 963 aaKnown RBP13.86□□□□□ -0.19
PDGFB-203ENST00000440375 STXBP2Q15833 593 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 FAM47CQ5HY64 1035 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 ZNF654Q8IZM8 581 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 SLC17A8Q8NDX2 589 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 SCLYQ96I15 445 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 IWS1Q96ST2 819 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 CDX2Q99626 313 aaPredicted RBP13.86□□□□□ -0.19
PDGFB-203ENST00000440375 PDCD2LQ9BRP1 358 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 IL23AQ9NPF7 189 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 CXXC1Q9P0U4 656 aaPredicted RBP13.86□□□□□ -0.19
PDGFB-203ENST00000440375 CHD7Q9P2D1 2997 aa13.86□□□□□ -0.19
PDGFB-203ENST00000440375 RBAK-RBAKDNI3L0D1 243 aa13.85□□□□□ -0.19
PDGFB-203ENST00000440375 RGS20O76081 388 aa13.85□□□□□ -0.19
PDGFB-203ENST00000440375 GH1P01241 217 aa13.85□□□□□ -0.19
PDGFB-203ENST00000440375 MMP3P08254 477 aa13.85□□□□□ -0.19
PDGFB-203ENST00000440375 PBX2P40425 430 aa13.85□□□□□ -0.19
PDGFB-203ENST00000440375 CREB3L3Q68CJ9 461 aa13.85□□□□□ -0.19
PDGFB-203ENST00000440375 PSRC1Q6PGN9 363 aaPredicted RBP13.85□□□□□ -0.19
PDGFB-203ENST00000440375 CATIPQ7Z7H3 387 aa13.85□□□□□ -0.19
PDGFB-203ENST00000440375 MYLIPQ8WY64 445 aa13.85□□□□□ -0.19
PDGFB-203ENST00000440375 ZFP91Q96JP5 570 aaPredicted RBP13.85□□□□□ -0.19
PDGFB-203ENST00000440375 SEZ6LQ9BYH1 1024 aa13.85□□□□□ -0.19
PDGFB-203ENST00000440375 BAZ2BQ9UIF8 2168 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms