RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 MKL1Q969V6 931 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 UIMC1Q96RL1 719 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 RMND1Q9NWS8 449 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 SLC37A4O43826 429 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 TPM1P09493 284 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 PLCG1P19174 1290 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 POLD1P28340 1107 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 JAG1P78504 1218 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 SMC1AQ14683 1233 aaKnown RBP15.86■□□□□ 0.13
LIMD1-202ENST00000440097 PPP1R18Q6NYC8 613 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 SIAH1Q8IUQ4 282 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 AK8Q96MA6 479 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 SCAF8Q9UPN6 1271 aaKnown RBP15.86■□□□□ 0.13
LIMD1-202ENST00000440097 ATRNL1Q5VV63 1379 aa15.85■□□□□ 0.13
LIMD1-202ENST00000440097 CALML4Q96GE6 196 aa15.85■□□□□ 0.13
LIMD1-202ENST00000440097 CDK5RAP3Q96JB5 506 aa15.85■□□□□ 0.13
LIMD1-202ENST00000440097 CCSER1Q9C0I3 900 aa15.85■□□□□ 0.13
LIMD1-202ENST00000440097 TMEM39BQ9GZU3 492 aa15.85■□□□□ 0.13
LIMD1-202ENST00000440097 HERC5Q9UII4 1024 aaKnown RBP15.85■□□□□ 0.13
LIMD1-202ENST00000440097 RRP1BQ14684 758 aaKnown RBP15.85■□□□□ 0.13
LIMD1-202ENST00000440097 ZYXQ15942 572 aaKnown RBP15.85■□□□□ 0.13
LIMD1-202ENST00000440097 DALRD3Q5D0E6 543 aaKnown RBP15.85■□□□□ 0.13
LIMD1-202ENST00000440097 INTS13Q9NVM9 706 aa15.85■□□□□ 0.13
LIMD1-202ENST00000440097 LRWD1Q9UFC0 647 aa15.85■□□□□ 0.13
LIMD1-202ENST00000440097 BMP3P12645 472 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 GPS2Q13227 327 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 NAALADL2Q58DX5 795 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 RAB34Q9BZG1 259 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 ECE1P42892 770 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 CXCL9Q07325 125 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 SPATA1Q5VX52 437 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 FAM151AQ8WW52 585 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 TAOK3Q9H2K8 898 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 TMX1Q9H3N1 280 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 ARHGEF10LQ9HCE6 1279 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 DDX25Q9UHL0 483 aaKnown RBP15.84■□□□□ 0.13
LIMD1-202ENST00000440097 GDAQ9Y2T3 454 aa15.84■□□□□ 0.13
LIMD1-202ENST00000440097 SIPA1L1O43166 1804 aa15.83■□□□□ 0.13
LIMD1-202ENST00000440097 POTEMA6NI47 508 aa15.83■□□□□ 0.13
LIMD1-202ENST00000440097 GYS2P54840 703 aa15.83■□□□□ 0.13
LIMD1-202ENST00000440097 ZSCAN26Q16670 478 aa15.83■□□□□ 0.13
LIMD1-202ENST00000440097 CDAN1Q8IWY9 1227 aa15.83■□□□□ 0.13
LIMD1-202ENST00000440097 GMLQ99445 158 aa15.83■□□□□ 0.13
LIMD1-202ENST00000440097 A0A1W2PRG0 241 aa15.83■□□□□ 0.12
LIMD1-202ENST00000440097 PPP1R3GB7ZBB8 358 aa15.83■□□□□ 0.12
LIMD1-202ENST00000440097 ZNF658Q5TYW1 1059 aaPredicted RBP15.83■□□□□ 0.12
LIMD1-202ENST00000440097 GJA10Q969M2 543 aa15.83■□□□□ 0.12
LIMD1-202ENST00000440097 AMNQ9BXJ7 453 aa15.83■□□□□ 0.12
LIMD1-202ENST00000440097 ZNF18P17022 549 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 PAK1Q13153 545 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 SYDE2Q5VT97 1194 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 GMCL1P1Q8NEA9 526 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 LRRC15Q8TF66 581 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.82■□□□□ 0.12
LIMD1-202ENST00000440097 BCS1LQ9Y276 419 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 ASIC1P78348 528 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 ORC2Q13416 577 aaPredicted RBP15.82■□□□□ 0.12
LIMD1-202ENST00000440097 NBPF9Q3BBW0 867 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 CIAPIN1Q6FI81 312 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 FBXO11Q86XK2 927 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 VSTM4Q8IW00 320 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 GPR161Q8N6U8 529 aaKnown RBP15.82■□□□□ 0.12
LIMD1-202ENST00000440097 NELFBQ8WX92 580 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 MTMR8Q96EF0 704 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 COL4A5P29400 1685 aa15.82■□□□□ 0.12
LIMD1-202ENST00000440097 ZSCAN12O43309 604 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 TAL1P17542 331 aaPredicted RBP15.81■□□□□ 0.12
LIMD1-202ENST00000440097 TGFB2P61812 414 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 AGBL3Q8NEM8 1001 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 ACER1Q8TDN7 264 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 CCDC47Q96A33 483 aaKnown RBP15.81■□□□□ 0.12
LIMD1-202ENST00000440097 GMCL1Q96IK5 515 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 WDR24Q96S15 920 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 ARFGAP3Q9NP61 516 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 LCMT1Q9UIC8 334 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 PPP2R2CQ9Y2T4 447 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 CASQ1P31415 396 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 PPP2R3AQ06190 1150 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 CT47A1Q5JQC4 288 aaPredicted RBP15.81■□□□□ 0.12
LIMD1-202ENST00000440097 SNX29Q8TEQ0 813 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 GLT8D2Q9H1C3 349 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 RASSF4Q9H2L5 321 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 GREB1LQ9C091 1923 aaPredicted RBP15.81■□□□□ 0.12
LIMD1-202ENST00000440097 PRCPP42785 496 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 STAT2P52630 851 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 GNG11P61952 73 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 MAP3K9P80192 1104 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 STIM1Q13586 685 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 KRT79Q5XKE5 535 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 IGSF22Q8N9C0 903 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 MTMR9Q96QG7 549 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 PARD6BQ9BYG5 372 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 KBTBD4Q9NVX7 518 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 ZBTB21Q9ULJ3 1066 aa15.81■□□□□ 0.12
LIMD1-202ENST00000440097 ZNF646O15015 1829 aaPredicted RBP15.8■□□□□ 0.12
LIMD1-202ENST00000440097 SHTN1A0MZ66 631 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 SPDYE3A6NKU9 549 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 WNT10BO00744 389 aa15.8■□□□□ 0.12
LIMD1-202ENST00000440097 TRIM66O15016 1216 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms