RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ARHGAP4P98171 946 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 USH1GQ495M9 461 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 HYIQ5T013 277 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 KRT79Q5XKE5 535 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 ADSSL1Q8N142 457 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 GIMAP8Q8ND71 665 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-202ENST00000439724 SNX29Q8TEQ0 813 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 NELFBQ8WX92 580 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 CDK5RAP3Q96JB5 506 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 TEPSINQ96N21 525 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 CTAGE1Q96RT6 745 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 RANBP17Q9H2T7 1088 aaKnown RBP13.23□□□□□ -0.29
SMAD3-202ENST00000439724 PPP1R1BQ9UD71 204 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-202ENST00000439724 SPDYE3A6NKU9 549 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 PHF20L1A8MW92 1017 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 NRDCO43847 1150 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 HOXA7P31268 230 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-202ENST00000439724 CIITAP33076 1130 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 PTGER2P43116 358 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 GMPSP49915 693 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-202ENST00000439724 RASSF7Q02833 373 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 SPAG1Q07617 926 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 TBX2Q13207 712 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-202ENST00000439724 STIM1Q13586 685 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 NR1I3Q14994 352 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 Q4G0T1 1027 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 COBLL1Q53SF7 1204 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 HSP90AA4PQ58FG1 418 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 CNNM4Q6P4Q7 775 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 SV2BQ7L1I2 683 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 SLFN12Q8IYM2 578 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 LARP4BQ92615 738 aaKnown RBP13.22□□□□□ -0.29
SMAD3-202ENST00000439724 P2RX7Q99572 595 aaKnown RBP13.22□□□□□ -0.29
SMAD3-202ENST00000439724 FEM1BQ9UK73 627 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 PCDHA12Q9UN75 941 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 KDM3AQ9Y4C1 1321 aa13.22□□□□□ -0.29
SMAD3-202ENST00000439724 EGFRP00533 1210 aa13.21□□□□□ -0.29
SMAD3-202ENST00000439724 CYP3A4P08684 503 aa13.21□□□□□ -0.29
SMAD3-202ENST00000439724 ASIC1P78348 528 aa13.21□□□□□ -0.29
SMAD3-202ENST00000439724 TPD52L1Q16890 204 aaPredicted RBP13.21□□□□□ -0.29
SMAD3-202ENST00000439724 DNTTIP2Q5QJE6 756 aaKnown RBP13.21□□□□□ -0.29
SMAD3-202ENST00000439724 MICALL2Q8IY33 904 aa13.21□□□□□ -0.29
SMAD3-202ENST00000439724 CCDC112Q8NEF3 446 aa13.21□□□□□ -0.29
SMAD3-202ENST00000439724 RAD54LQ92698 747 aa13.21□□□□□ -0.29
SMAD3-202ENST00000439724 LRRC27Q9C0I9 530 aa13.21□□□□□ -0.29
SMAD3-202ENST00000439724 EXOC1Q9NV70 894 aa13.21□□□□□ -0.29
SMAD3-202ENST00000439724 ADD3Q9UEY8 706 aaKnown RBP13.21□□□□□ -0.29
SMAD3-202ENST00000439724 LIMA1Q9UHB6 759 aaKnown RBP13.21□□□□□ -0.29
SMAD3-202ENST00000439724 R3HCC1Q9Y3T6 440 aaKnown RBP13.21□□□□□ -0.29
SMAD3-202ENST00000439724 PVALEFA0A1B0GWK0 134 aa13.2□□□□□ -0.3
SMAD3-202ENST00000439724 H7C1D1 291 aa13.2□□□□□ -0.3
SMAD3-202ENST00000439724 PSMA7O14818 248 aa13.2□□□□□ -0.3
SMAD3-202ENST00000439724 MARCH6O60337 910 aa13.2□□□□□ -0.3
SMAD3-202ENST00000439724 PRELPP51888 382 aa13.2□□□□□ -0.3
SMAD3-202ENST00000439724 SPECC1LQ69YQ0 1117 aa13.2□□□□□ -0.3
SMAD3-202ENST00000439724 ETNPPLQ8TBG4 499 aa13.2□□□□□ -0.3
SMAD3-202ENST00000439724 DHTKD1Q96HY7 919 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-202ENST00000439724 NUDT12Q9BQG2 462 aa13.2□□□□□ -0.3
SMAD3-202ENST00000439724 GLIS2Q9BZE0 524 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-202ENST00000439724 NT5C3AQ9H0P0 336 aa13.2□□□□□ -0.3
SMAD3-202ENST00000439724 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-202ENST00000439724 DOCK1Q14185 1865 aa13.2□□□□□ -0.3
SMAD3-202ENST00000439724 SMCHD1A6NHR9 2005 aa13.2□□□□□ -0.3
SMAD3-202ENST00000439724 DICER1Q9UPY3 1922 aaKnown RBP13.2□□□□□ -0.3
SMAD3-202ENST00000439724 LRRC10BA6NIK2 292 aa13.19□□□□□ -0.3
SMAD3-202ENST00000439724 PBX1P40424 430 aa13.19□□□□□ -0.3
SMAD3-202ENST00000439724 PDE4DQ08499 809 aa13.19□□□□□ -0.3
SMAD3-202ENST00000439724 MCM6Q14566 821 aa13.19□□□□□ -0.3
SMAD3-202ENST00000439724 KIF4BQ2VIQ3 1234 aa13.19□□□□□ -0.3
SMAD3-202ENST00000439724 FILIP1LQ4L180 1135 aa13.19□□□□□ -0.3
SMAD3-202ENST00000439724 UNC13DQ70J99 1090 aa13.19□□□□□ -0.3
SMAD3-202ENST00000439724 NOC3LQ8WTT2 800 aaKnown RBP13.19□□□□□ -0.3
SMAD3-202ENST00000439724 LPAR1Q92633 364 aa13.19□□□□□ -0.3
SMAD3-202ENST00000439724 LENG9Q96B70 501 aa13.19□□□□□ -0.3
SMAD3-202ENST00000439724 TMX1Q9H3N1 280 aa13.19□□□□□ -0.3
SMAD3-202ENST00000439724 CNOT7Q9UIV1 285 aaKnown RBP13.19□□□□□ -0.3
SMAD3-202ENST00000439724 MRPL11Q9Y3B7 192 aaKnown RBP13.19□□□□□ -0.3
SMAD3-202ENST00000439724 ABCB11O95342 1321 aa13.19□□□□□ -0.3
SMAD3-202ENST00000439724 MYMKA6NI61 221 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 WDR46O15213 610 aaKnown RBP13.18□□□□□ -0.3
SMAD3-202ENST00000439724 CTNND1O60716 968 aaKnown RBP13.18□□□□□ -0.3
SMAD3-202ENST00000439724 TAL1P17542 331 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-202ENST00000439724 SPIRE1Q08AE8 756 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 KRT31Q15323 416 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 ZYXQ15942 572 aaKnown RBP13.18□□□□□ -0.3
SMAD3-202ENST00000439724 TTI2Q6NXR4 508 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 SAMD7Q7Z3H4 446 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 ANKRD20A12PQ8NF67 263 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 KIFC2Q96AC6 838 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 PRIMPOLQ96LW4 560 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 FAM20AQ96MK3 541 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 FEZ1Q99689 392 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 KIAA1683Q9H0B3 1180 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 DEFB129Q9H1M3 183 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 THAP9Q9H5L6 903 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 HACL1Q9UJ83 578 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 ITIH6Q6UXX5 1313 aa13.18□□□□□ -0.3
SMAD3-202ENST00000439724 ZNF541Q9H0D2 1346 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms