RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 TMEM63BQ5T3F8 832 aa21.84■■□□□ 1.09
CCDC78-204ENST00000439619 PSRC1Q6PGN9 363 aaPredicted RBP21.84■■□□□ 1.09
CCDC78-204ENST00000439619 HOMER1Q86YM7 354 aa21.84■■□□□ 1.09
CCDC78-204ENST00000439619 TAAR1Q96RJ0 339 aa21.84■■□□□ 1.09
CCDC78-204ENST00000439619 MCM3APO60318 1980 aa21.84■■□□□ 1.09
CCDC78-204ENST00000439619 LRRC37A2A6NM11 1700 aa21.83■■□□□ 1.09
CCDC78-204ENST00000439619 PTGS1P23219 599 aa21.83■■□□□ 1.09
CCDC78-204ENST00000439619 EPHB4P54760 987 aa21.83■■□□□ 1.09
CCDC78-204ENST00000439619 PSMC6P62333 389 aa21.83■■□□□ 1.09
CCDC78-204ENST00000439619 PURAQ00577 322 aaKnown RBP21.83■■□□□ 1.09
CCDC78-204ENST00000439619 SEPT14Q6ZU15 432 aa21.83■■□□□ 1.09
CCDC78-204ENST00000439619 CENPQQ7L2Z9 268 aaPredicted RBP21.83■■□□□ 1.09
CCDC78-204ENST00000439619 TBC1D5Q92609 795 aa21.83■■□□□ 1.09
CCDC78-204ENST00000439619 MTIF3Q9H2K0 278 aaKnown RBP21.83■■□□□ 1.09
CCDC78-204ENST00000439619 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.82■■□□□ 1.08
CCDC78-204ENST00000439619 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.82■■□□□ 1.08
CCDC78-204ENST00000439619 A6NJR5 290 aa21.82■■□□□ 1.08
CCDC78-204ENST00000439619 EIF3JO75822 258 aaKnown RBP21.82■■□□□ 1.08
CCDC78-204ENST00000439619 CSF2RAP15509 400 aa21.82■■□□□ 1.08
CCDC78-204ENST00000439619 KIF5BP33176 963 aa21.82■■□□□ 1.08
CCDC78-204ENST00000439619 TMTC2Q8N394 836 aa21.82■■□□□ 1.08
CCDC78-204ENST00000439619 SLC17A8Q8NDX2 589 aa21.82■■□□□ 1.08
CCDC78-204ENST00000439619 MTMR8Q96EF0 704 aa21.82■■□□□ 1.08
CCDC78-204ENST00000439619 MTA3Q9BTC8 594 aa21.82■■□□□ 1.08
CCDC78-204ENST00000439619 B4GALT4O60513 344 aa21.81■■□□□ 1.08
CCDC78-204ENST00000439619 GH1P01241 217 aa21.81■■□□□ 1.08
CCDC78-204ENST00000439619 EIF2AK2P19525 551 aaKnown RBP21.81■■□□□ 1.08
CCDC78-204ENST00000439619 HSD17B4P51659 736 aa21.81■■□□□ 1.08
CCDC78-204ENST00000439619 FAM47CQ5HY64 1035 aa21.81■■□□□ 1.08
CCDC78-204ENST00000439619 CHST3Q7LGC8 479 aa21.81■■□□□ 1.08
CCDC78-204ENST00000439619 CTCFLQ8NI51 663 aaPredicted RBP21.81■■□□□ 1.08
CCDC78-204ENST00000439619 FAM161BQ96MY7 647 aa21.81■■□□□ 1.08
CCDC78-204ENST00000439619 TRPV6Q9H1D0 765 aa21.81■■□□□ 1.08
CCDC78-204ENST00000439619 ALDH8A1Q9H2A2 487 aaPredicted RBP21.81■■□□□ 1.08
CCDC78-204ENST00000439619 RIOX1Q9H6W3 641 aa21.81■■□□□ 1.08
CCDC78-204ENST00000439619 GRIN2DO15399 1336 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 TMEM265A0A087WTH1 108 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 PNMA6FA0A0J9YX94 578 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 NR3C2P08235 984 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 CYP2C18P33260 490 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 MCM5P33992 734 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 TROAPQ12815 778 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 NFXL1Q6ZNB6 911 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 MB21D2Q8IYB1 491 aaPredicted RBP21.8■■□□□ 1.08
CCDC78-204ENST00000439619 PIGSQ96S52 555 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.8■■□□□ 1.08
CCDC78-204ENST00000439619 ESYT1Q9BSJ8 1104 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 IL23AQ9NPF7 189 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 PXMP2Q9NR77 195 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 COL20A1Q9P218 1284 aa21.8■■□□□ 1.08
CCDC78-204ENST00000439619 GCOM1H8Y6P7 765 aaPredicted RBP21.79■■□□□ 1.08
CCDC78-204ENST00000439619 DDAH1O94760 285 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 POLR2MP0CAP2 368 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 GHRHRQ02643 423 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 PTPN11Q06124 597 aaPredicted RBP21.79■■□□□ 1.08
CCDC78-204ENST00000439619 BMP2KLQ5H9B9 411 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 RNF20Q5VTR2 975 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 NFRKBQ6P4R8 1299 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 CCDC62Q6P9F0 684 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 KCNV1Q6PIU1 500 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 STOX1Q6ZVD7 989 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 RPUSD2Q8IZ73 545 aaKnown RBP21.79■■□□□ 1.08
CCDC78-204ENST00000439619 IGDCC4Q8TDY8 1250 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 COPS5Q92905 334 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 TMEM87BQ96K49 555 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 MAP3K14Q99558 947 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 LZTS2Q9BRK4 669 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 ANO2Q9NQ90 1003 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 NOD1Q9Y239 953 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 MRVI1Q9Y6F6 885 aa21.79■■□□□ 1.08
CCDC78-204ENST00000439619 CCDC69A6NI79 296 aa21.78■■□□□ 1.08
CCDC78-204ENST00000439619 CASTP20810 708 aaKnown RBP21.78■■□□□ 1.08
CCDC78-204ENST00000439619 GNAQP50148 359 aa21.78■■□□□ 1.08
CCDC78-204ENST00000439619 TMEM240Q5SV17 173 aa21.78■■□□□ 1.08
CCDC78-204ENST00000439619 NOC4LQ9BVI4 516 aaKnown RBP21.78■■□□□ 1.08
CCDC78-204ENST00000439619 SEMA6BQ9H3T3 888 aa21.78■■□□□ 1.08
CCDC78-204ENST00000439619 SEC63Q9UGP8 760 aaKnown RBP21.78■■□□□ 1.08
CCDC78-204ENST00000439619 TAF6LQ9Y6J9 622 aa21.78■■□□□ 1.08
CCDC78-204ENST00000439619 LCTP09848 1927 aa21.77■■□□□ 1.08
CCDC78-204ENST00000439619 PRC1O43663 620 aa21.77■■□□□ 1.08
CCDC78-204ENST00000439619 PPP1R11O60927 126 aaPredicted RBP21.77■■□□□ 1.08
CCDC78-204ENST00000439619 ARIH2O95376 493 aa21.77■■□□□ 1.08
CCDC78-204ENST00000439619 FGBP02675 491 aa21.77■■□□□ 1.08
CCDC78-204ENST00000439619 MYCLP12524 364 aaPredicted RBP21.77■■□□□ 1.08
CCDC78-204ENST00000439619 ANTXR2P58335 489 aa21.77■■□□□ 1.08
CCDC78-204ENST00000439619 LY6KQ17RY6 165 aa21.77■■□□□ 1.08
CCDC78-204ENST00000439619 NBPF20Q3BBV1 942 aa21.77■■□□□ 1.08
CCDC78-204ENST00000439619 ZNF654Q8IZM8 581 aa21.77■■□□□ 1.08
CCDC78-204ENST00000439619 AFG1LQ8WV93 481 aa21.77■■□□□ 1.08
CCDC78-204ENST00000439619 RRP36Q96EU6 259 aaKnown RBP21.77■■□□□ 1.08
CCDC78-204ENST00000439619 LSG1Q9H089 658 aaKnown RBP21.77■■□□□ 1.08
CCDC78-204ENST00000439619 SENP2Q9HC62 589 aa21.77■■□□□ 1.08
CCDC78-204ENST00000439619 CALM1P0DP23 149 aa21.76■■□□□ 1.07
CCDC78-204ENST00000439619 CALM2P0DP24 149 aa21.76■■□□□ 1.07
CCDC78-204ENST00000439619 CALM3P0DP25 149 aa21.76■■□□□ 1.07
CCDC78-204ENST00000439619 ACRP10323 421 aa21.76■■□□□ 1.07
CCDC78-204ENST00000439619 HOXA13P31271 388 aaPredicted RBP21.76■■□□□ 1.07
CCDC78-204ENST00000439619 CCL23P55773 120 aa21.76■■□□□ 1.07
CCDC78-204ENST00000439619 CHMP4BP1P59074 171 aa21.76■■□□□ 1.07
CCDC78-204ENST00000439619 LAMC2Q13753 1193 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms