RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CNTNAP5Q8WYK1 1306 aa11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 ZNF142P52746 1687 aaPredicted RBP11.02□□□□□ -0.65
CDC42SE1-202ENST00000439374 A0A087WUV0 522 aaPredicted RBP11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP17L5A8MUK1 530 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 FCER1AP12319 257 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 USP14P54578 494 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 RASSF7Q02833 373 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 CEP85LQ5SZL2 805 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 C8orf74Q6P047 294 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 KCTD1Q719H9 257 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 PNMA8AQ86V59 439 aaPredicted RBP11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 FCHSD1Q86WN1 690 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 EFCAB13Q8IY85 973 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 CDCA7Q9BWT1 371 aaPredicted RBP11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 DDAH1O94760 285 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 CLSTN1O94985 981 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 ZNF18P17022 549 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 PLCG1P19174 1290 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 NNTQ13423 1086 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 PFKFB3Q16875 520 aaPredicted RBP11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 CACNA2D4Q7Z3S7 1137 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 FBXO33Q7Z6M2 555 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 TSEN2Q8NCE0 465 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 OR8K1Q8NGG5 319 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 TBCKQ8TEA7 893 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 CTAGE1Q96RT6 745 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 EPB41L5Q9HCM4 733 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 IL17RBQ9NRM6 502 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 BAIAP2L1Q9UHR4 511 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 TMCO5BA8MYB1 307 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 BMP15O95972 392 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 TMOD1P28289 359 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 ARHGAP25P42331 645 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 SLC20A2Q08357 652 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 ADCY1Q08828 1119 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 IL17AQ16552 155 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 RRAGAQ7L523 313 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 DDX42Q86XP3 938 aaKnown RBP eCLIP11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 WDR66Q8TBY9 1149 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 CEP95Q96GE4 821 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 GSDMAQ96QA5 445 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 NOC4LQ9BVI4 516 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 NARFQ9UHQ1 456 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 GGA1Q9UJY5 639 aa11.01□□□□□ -0.65
CDC42SE1-202ENST00000439374 POTEMA6NI47 508 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 PPP1R3GB7ZBB8 358 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 CDK8P49336 464 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 SF3B3Q15393 1217 aaKnown RBP11□□□□□ -0.65
CDC42SE1-202ENST00000439374 TXNRD1Q16881 649 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 KIAA0825Q8IV33 1275 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 CALML4Q96GE6 196 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 MED4Q9NPJ6 270 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 PCDHA4Q9UN74 947 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 CAPN6Q9Y6Q1 641 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 DCCP43146 1447 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 PDHBP11177 359 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 ERCC5P28715 1186 aaPredicted RBP11□□□□□ -0.65
CDC42SE1-202ENST00000439374 NF2P35240 595 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 GPSM2P81274 684 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 CLEC4GQ6UXB4 293 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 MAEAQ7L5Y9 396 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 UBLCP1Q8WVY7 318 aaPredicted RBP11□□□□□ -0.65
CDC42SE1-202ENST00000439374 PANX2Q96RD6 677 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 KRT12Q99456 494 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 IFIH1Q9BYX4 1025 aaKnown RBP11□□□□□ -0.65
CDC42SE1-202ENST00000439374 C6orf50Q9HD87 102 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 GTPBP6O43824 516 aaPredicted RBP11□□□□□ -0.65
CDC42SE1-202ENST00000439374 PAFAH1B1P43034 410 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 SF3B2Q13435 895 aaKnown RBP11□□□□□ -0.65
CDC42SE1-202ENST00000439374 NONOQ15233 471 aaKnown RBP eCLIP11□□□□□ -0.65
CDC42SE1-202ENST00000439374 USH1GQ495M9 461 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 ZC3H12CQ9C0D7 883 aaKnown RBP11□□□□□ -0.65
CDC42SE1-202ENST00000439374 REXO2Q9Y3B8 237 aaKnown RBP11□□□□□ -0.65
CDC42SE1-202ENST00000439374 HYOU1Q9Y4L1 999 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 UTRNP46939 3433 aa11□□□□□ -0.65
CDC42SE1-202ENST00000439374 RPS6KA4O75676 772 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 FAM153BP0C7A2 387 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 TAL1P17542 331 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 GBP2P32456 591 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 EPS15P42566 896 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 CARSP49589 748 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 ATP2C1P98194 919 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 HDLBPQ00341 1268 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 FAM153CQ494X1 144 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 C12orf60Q5U649 245 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 UBXN6Q9BZV1 441 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 NHEJ1Q9H9Q4 299 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 RMND1Q9NWS8 449 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 FAM153AQ9UHL3 310 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 SUFUQ9UMX1 484 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 EHHADHQ08426 723 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 ZYXQ15942 572 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 TTBK2Q6IQ55 1244 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 RCSD1Q6JBY9 416 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 TRIML1Q8N9V2 468 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 TRPM3Q9HCF6 1732 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 CYTH3O43739 400 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 TOM1O60784 492 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 TRIM37O94972 964 aa10.99□□□□□ -0.65
CDC42SE1-202ENST00000439374 GNAQP50148 359 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms