RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 RRP36Q96EU6 259 aaKnown RBP17.4■□□□□ 0.38
DHFR-201ENST00000439211 ZHX3Q9H4I2 956 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 EXOC1Q9NV70 894 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 EPN1Q9Y6I3 576 aaPredicted RBP17.4■□□□□ 0.38
DHFR-201ENST00000439211 A0A087X0B3 334 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 ERVV-1B6SEH8 477 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 PRPF3O43395 683 aaKnown RBP17.4■□□□□ 0.38
DHFR-201ENST00000439211 CYP2D6P10635 497 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 C8orf74Q6P047 294 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 KLHL23Q8NBE8 558 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 CHD2O14647 1828 aaKnown RBP17.4■□□□□ 0.38
DHFR-201ENST00000439211 ZNF18P17022 549 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 MDM2Q00987 491 aaPredicted RBP17.4■□□□□ 0.38
DHFR-201ENST00000439211 TMEM139Q8IV31 216 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 ADD3Q9UEY8 706 aaKnown RBP17.4■□□□□ 0.38
DHFR-201ENST00000439211 STK38LQ9Y2H1 464 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 PLCB4Q15147 1175 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 ADGRA1Q86SQ6 560 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 TAX1BP1Q86VP1 789 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 OR8K1Q8NGG5 319 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 MYCBPAPQ8TBZ2 947 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 PPP1R12CQ9BZL4 782 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 PAPOLBQ9NRJ5 636 aaKnown RBP17.39■□□□□ 0.37
DHFR-201ENST00000439211 MYO1AQ9UBC5 1043 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 L3MBTL1Q9Y468 752 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 RIC1Q4ADV7 1423 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 ANP32DO95626 131 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 PYGLP06737 847 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 GOLGA8HP0CJ92 632 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 HVCN1Q96D96 273 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 SAP30BPQ9UHR5 308 aaKnown RBP17.39■□□□□ 0.37
DHFR-201ENST00000439211 CRYBG1Q9Y4K1 1723 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 GTPBP6O43824 516 aaPredicted RBP17.39■□□□□ 0.37
DHFR-201ENST00000439211 CYLC1P35663 651 aaPredicted RBP17.39■□□□□ 0.37
DHFR-201ENST00000439211 NAPAP54920 295 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 HHATQ5VTY9 493 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 MMRN2Q9H8L6 949 aa17.39■□□□□ 0.37
DHFR-201ENST00000439211 PP2D1A8MPX8 630 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 GNAT1P11488 350 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 PDE4DQ08499 809 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.38■□□□□ 0.37
DHFR-201ENST00000439211 SMIM5Q71RC9 77 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 BLIDQ8IZY5 108 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 GOLGA6L10A0A0M3HER8 536 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 AKR1B10O60218 316 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 HIBADHP31937 336 aaKnown RBP17.38■□□□□ 0.37
DHFR-201ENST00000439211 PAPOLAP51003 745 aaKnown RBP17.38■□□□□ 0.37
DHFR-201ENST00000439211 EPHB4P54760 987 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 DRP2Q13474 957 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 CUL5Q93034 780 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 PSMD1Q99460 953 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 TACC3Q9Y6A5 838 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 LOC102724428A0A0B4J2F2 783 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 SIK1P57059 783 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 LMNTD2Q8IXW0 634 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 CCDC51Q96ER9 411 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 CCDC42Q96M95 316 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 NLRP3Q96P20 1036 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 TRIM10Q9UDY6 481 aa17.38■□□□□ 0.37
DHFR-201ENST00000439211 PARP1P09874 1014 aaKnown RBP17.37■□□□□ 0.37
DHFR-201ENST00000439211 FGFR2P21802 821 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 TAF11Q15544 211 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 ALS2CLQ60I27 953 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 SLC4A9Q96Q91 983 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 CHP1Q99653 195 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 HOMER3Q9NSC5 361 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 SEC63Q9UGP8 760 aaKnown RBP17.37■□□□□ 0.37
DHFR-201ENST00000439211 RGPD5Q99666 1765 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 GYPCP04921 128 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 ATP1A1P05023 1023 aaKnown RBP17.37■□□□□ 0.37
DHFR-201ENST00000439211 PTGISQ16647 500 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 TDRD12Q587J7 1177 aaKnown RBP17.37■□□□□ 0.37
DHFR-201ENST00000439211 TMTC3Q6ZXV5 915 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 SRBD1Q8N5C6 995 aaKnown RBP17.37■□□□□ 0.37
DHFR-201ENST00000439211 ABHD10Q9NUJ1 306 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 TFR2Q9UP52 801 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 HGSO14964 777 aaPredicted RBP17.37■□□□□ 0.37
DHFR-201ENST00000439211 RASSF9O75901 435 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 KIF5AQ12840 1032 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 TBX2Q13207 712 aaPredicted RBP17.37■□□□□ 0.37
DHFR-201ENST00000439211 ZC3H12AQ5D1E8 599 aaKnown RBP17.37■□□□□ 0.37
DHFR-201ENST00000439211 CACNA2D4Q7Z3S7 1137 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 PNMA1Q8ND90 353 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 UIMC1Q96RL1 719 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 ZCWPW1Q9H0M4 648 aa17.37■□□□□ 0.37
DHFR-201ENST00000439211 PNPLA7Q6ZV29 1317 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 PRCPP42785 496 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 SARSP49591 514 aaKnown RBP17.36■□□□□ 0.37
DHFR-201ENST00000439211 KRT83P78385 493 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 ERFEQ4G0M1 354 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 TCP11X2Q5H9J9 407 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 ZNF34Q8IZ26 560 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 TATDN2Q93075 761 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 CYFIP2Q96F07 1278 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 PHF20Q9BVI0 1012 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 C5P01031 1676 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 B4DLN1 442 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 LUC7L3O95232 432 aaKnown RBP17.36■□□□□ 0.37
DHFR-201ENST00000439211 DPYDQ12882 1025 aa17.36■□□□□ 0.37
DHFR-201ENST00000439211 USP4Q13107 963 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms