RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 BLIDQ8IZY5 108 aa16.36■□□□□ 0.21
TSC2-206ENST00000439117 LRRC47Q8N1G4 583 aaKnown RBP16.36■□□□□ 0.21
TSC2-206ENST00000439117 STAMQ92783 540 aa16.36■□□□□ 0.21
TSC2-206ENST00000439117 ABTB1Q969K4 478 aaPredicted RBP16.36■□□□□ 0.21
TSC2-206ENST00000439117 EPB41L5Q9HCM4 733 aa16.36■□□□□ 0.21
TSC2-206ENST00000439117 MED14O60244 1454 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 NOP56O00567 594 aaKnown RBP16.35■□□□□ 0.21
TSC2-206ENST00000439117 COPB1P53618 953 aaKnown RBP16.35■□□□□ 0.21
TSC2-206ENST00000439117 CCDC17Q96LX7 622 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 KRT12Q99456 494 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 BLZF1Q9H2G9 400 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 PCDHA5Q9Y5H7 936 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 ARHGAP4P98171 946 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 GRAPQ13588 217 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 KMT5BQ4FZB7 885 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 PI16Q6UXB8 463 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 C11orf57Q6ZUT1 292 aaPredicted RBP16.35■□□□□ 0.21
TSC2-206ENST00000439117 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
TSC2-206ENST00000439117 BIN2Q9UBW5 565 aaPredicted RBP16.35■□□□□ 0.21
TSC2-206ENST00000439117 BUB1O43683 1085 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 PDIA3P30101 505 aaKnown RBP16.35■□□□□ 0.21
TSC2-206ENST00000439117 ZNF589Q86UQ0 364 aaPredicted RBP16.35■□□□□ 0.21
TSC2-206ENST00000439117 CABP7Q86V35 215 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 NLRP7Q8WX94 980 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 SH3GL3Q99963 347 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 SPZ1Q9BXG8 430 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 SLC24A3Q9HC58 644 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 SCG2P13521 617 aa16.35■□□□□ 0.21
TSC2-206ENST00000439117 BSDC1Q9NW68 430 aaPredicted RBP16.35■□□□□ 0.21
TSC2-206ENST00000439117 ENC1O14682 589 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 GTPBP6O43824 516 aaPredicted RBP16.34■□□□□ 0.21
TSC2-206ENST00000439117 SERPINB6P35237 376 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 ADCK5Q3MIX3 580 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 CCDC93Q567U6 631 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 EAPPQ56P03 285 aaPredicted RBP16.34■□□□□ 0.21
TSC2-206ENST00000439117 ARHGEF18Q6ZSZ5 1173 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 PDCD7Q8N8D1 485 aaKnown RBP16.34■□□□□ 0.21
TSC2-206ENST00000439117 HAUS1Q96CS2 278 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 CENPKQ9BS16 269 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 PASKQ96RG2 1323 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 DDX39AO00148 427 aaKnown RBP16.34■□□□□ 0.21
TSC2-206ENST00000439117 MAP3K7O43318 606 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 EIF3BP55884 814 aaKnown RBP16.34■□□□□ 0.21
TSC2-206ENST00000439117 DPCR1Q3MIW9 517 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 GSDMAQ96QA5 445 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.34■□□□□ 0.21
TSC2-206ENST00000439117 C1orf167Q5SNV9 1468 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 CAMSAP1Q5T5Y3 1602 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 CRCPO75575 148 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 CD2BP2O95400 341 aaKnown RBP16.34■□□□□ 0.21
TSC2-206ENST00000439117 VSTM4Q8IW00 320 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 U2AF1L4Q8WU68 220 aaKnown RBP16.34■□□□□ 0.21
TSC2-206ENST00000439117 FNBP1Q96RU3 617 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 ANKRD35Q8N283 1001 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 YY1AP1Q9H869 796 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 PSTPIP2Q9H939 334 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 XAB2Q9HCS7 855 aaKnown RBP16.34■□□□□ 0.21
TSC2-206ENST00000439117 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
TSC2-206ENST00000439117 FRMPD2Q68DX3 1309 aaPredicted RBP16.33■□□□□ 0.21
TSC2-206ENST00000439117 ADCY8P40145 1251 aa16.33■□□□□ 0.21
TSC2-206ENST00000439117 ZNF827Q17R98 1081 aa16.33■□□□□ 0.21
TSC2-206ENST00000439117 PALM2Q8IXS6 379 aa16.33■□□□□ 0.21
TSC2-206ENST00000439117 LSM14BQ9BX40 385 aaKnown RBP16.33■□□□□ 0.21
TSC2-206ENST00000439117 SCINQ9Y6U3 715 aa16.33■□□□□ 0.21
TSC2-206ENST00000439117 M0R2C6 588 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 STK10O94804 968 aaKnown RBP16.33■□□□□ 0.2
TSC2-206ENST00000439117 BIRC3Q13489 604 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 DBNDD1Q9H9R9 158 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 RCOR1Q9UKL0 485 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 SART1O43290 800 aaKnown RBP16.33■□□□□ 0.2
TSC2-206ENST00000439117 ZMYND10O75800 440 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 GOLGA8HP0CJ92 632 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 DYNLL1P63167 89 aaKnown RBP16.33■□□□□ 0.2
TSC2-206ENST00000439117 SLFN13Q68D06 897 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 CC2D2BQ6DHV5 1058 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 GALNT17Q6IS24 598 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 MORC4Q8TE76 937 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 GIPC1O14908 333 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 MMP10P09238 476 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 NPR1P16066 1061 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 ABCB5Q2M3G0 1257 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 ST13P4Q8IZP2 240 aaPredicted RBP16.33■□□□□ 0.2
TSC2-206ENST00000439117 CCDC89Q8N998 374 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 EXOC7Q9UPT5 735 aa16.33■□□□□ 0.2
TSC2-206ENST00000439117 ANKRD65E5RJM6 399 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 IRX1P78414 480 aaPredicted RBP16.32■□□□□ 0.2
TSC2-206ENST00000439117 EHHADHQ08426 723 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 BIRC2Q13490 618 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 FAM133BQ5BKY9 247 aaKnown RBP16.32■□□□□ 0.2
TSC2-206ENST00000439117 SRLQ86TD4 932 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 CTAGE3PQ8IX95 158 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 SMCR8Q8TEV9 937 aaPredicted RBP16.32■□□□□ 0.2
TSC2-206ENST00000439117 OSBP2Q969R2 916 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 PANX2Q96RD6 677 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 ANGPTL2Q9UKU9 493 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 BCORL1Q5H9F3 1711 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 LMNAP02545 664 aaKnown RBP16.32■□□□□ 0.2
TSC2-206ENST00000439117 HARSP12081 509 aaKnown RBP16.32■□□□□ 0.2
TSC2-206ENST00000439117 NT5C3AQ9H0P0 336 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 PFDN4Q9NQP4 134 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms