RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 ZNF445P59923 1031 aa8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 RESTQ13127 1097 aa8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 PCSK7Q16549 785 aa8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 TMEM67Q5HYA8 995 aa8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 LCE5AQ5TCM9 118 aa8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 CPLX2Q6PUV4 134 aaKnown RBP8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 C2CD5Q86YS7 1000 aa8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 WFDC8Q8IUA0 241 aa8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 FBXO18Q8NFZ0 1043 aa8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 GPT2Q8TD30 523 aa8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 FOXD4L4Q8WXT5 416 aaPredicted RBP8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 SCAND2PQ9GZW5 306 aaPredicted RBP8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 TMX4Q9H1E5 349 aaPredicted RBP8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 NCOA5Q9HCD5 579 aaKnown RBP8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 TCP11L1Q9NUJ3 509 aa8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 MROH7-TTC4A0A0A0MT08 1334 aa8.27□□□□□ -1.09
HMGN1P6-201ENST00000438508 CCDC196A0A1B0GTZ2 297 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 ERICH2A1L162 156 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 VPS37CA5D8V6 355 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 CDKL5O76039 1030 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 IFNAR1P17181 557 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 METAP2P50579 478 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 RHBDL3P58872 404 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 UBE2HP62256 183 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 KRT85P78386 507 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 HDLBPQ00341 1268 aaKnown RBP8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 DNM1Q05193 864 aaKnown RBP8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 PDE4BQ07343 736 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 TBC1D8BQ0IIM8 1120 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 SF3B2Q13435 895 aaKnown RBP8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 WTAPQ15007 396 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 CCDC178Q5BJE1 867 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 MFSD14BQ5SR56 506 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 L1TD1Q5T7N2 865 aaKnown RBP8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 HHIPL2Q6UWX4 724 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 DPP8Q6V1X1 898 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 SYNE3Q6ZMZ3 975 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 CDC37L1Q7L3B6 337 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 DDX11Q96FC9 970 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 CHAMP1Q96JM3 812 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 GPR101Q96P66 508 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 NOL10Q9BSC4 688 aaKnown RBP8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 VPS33BQ9H267 617 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 ORC3Q9UBD5 711 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 STOML1Q9UBI4 398 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 RCOR1Q9UKL0 485 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 CFAP45Q9UL16 551 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 CNPY2Q9Y2B0 182 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 SLC12A7Q9Y666 1083 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 KIF13BQ9NQT8 1826 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 STK36Q9NRP7 1315 aa8.26□□□□□ -1.09
HMGN1P6-201ENST00000438508 ROBO3Q96MS0 1386 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 PSME4Q14997 1843 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 CCDC69A6NI79 296 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 PRR19A6NJB7 356 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 GOLGA8BA8MQT2 603 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 H3BQV1 296 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 CPLX1O14810 134 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 CDC27P30260 824 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 GTF2IP78347 998 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 IQCA1Q86XH1 822 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 DGKHQ86XP1 1220 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 FANCBQ8NB91 859 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 BANK1Q8NDB2 785 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 SUPT20HQ8NEM7 779 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 ZNF622Q969S3 477 aaKnown RBP eCLIP8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 MAP3K14Q99558 947 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 IGFLR1Q9H665 355 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 SNED1Q8TER0 1413 aa8.25□□□□□ -1.09
HMGN1P6-201ENST00000438508 ZNF646O15015 1829 aaPredicted RBP8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 ECM29Q5VYK3 1845 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 CYP2D7A0A087X1C5 515 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 GOLGA6L3A6NEY3 463 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 SMIM22K7EJ46 135 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 GADD45BO75293 160 aaPredicted RBP8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 LETM1O95202 739 aaPredicted RBP8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 CALM1P0DP23 149 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 CALM2P0DP24 149 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 CALM3P0DP25 149 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 IARSP41252 1262 aaKnown RBP8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 USP5P45974 858 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 MRE11P49959 708 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 EPHA4P54764 986 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 TROAPQ12815 778 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 RRP12Q5JTH9 1297 aaKnown RBP8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 STRIP1Q5VSL9 837 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 NFXL1Q6ZNB6 911 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 TTC6Q86TZ1 520 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 ZNF654Q8IZM8 581 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 CRACR2BQ8N4Y2 399 aaPredicted RBP8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 ENAHQ8N8S7 591 aaPredicted RBP8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 SH3RF3Q8TEJ3 882 aaPredicted RBP8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 WASF1Q92558 559 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 SYAP1Q96A49 352 aaPredicted RBP8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 C8orf76Q96K31 380 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 ZNF396Q96N95 335 aaPredicted RBP8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 LPIN3Q9BQK8 851 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 UBAC1Q9BSL1 405 aa8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 GZF1Q9H116 711 aaPredicted RBP8.24□□□□□ -1.09
HMGN1P6-201ENST00000438508 ZNF287Q9HBT7 754 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms