RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 MRGPRX3Q96LB0 322 aa7.9□□□□□ -1.14
SPEN-202ENST00000438066 YIPF4Q9BSR8 244 aa7.9□□□□□ -1.14
SPEN-202ENST00000438066 TRIM8Q9BZR9 551 aa7.9□□□□□ -1.14
SPEN-202ENST00000438066 AASDHPPTQ9NRN7 309 aa7.9□□□□□ -1.14
SPEN-202ENST00000438066 MBIPQ9NS73 344 aa7.9□□□□□ -1.14
SPEN-202ENST00000438066 SHOXO15266 292 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 BRINP1O60477 761 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 EFCAB14O75071 495 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 TNNT2P45379 298 aaPredicted RBP7.89□□□□□ -1.15
SPEN-202ENST00000438066 UBE4AQ14139 1066 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 TRIM59Q8IWR1 403 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 UBASH3BQ8TF42 649 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 COG1Q8WTW3 980 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 TTC1Q99614 292 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 EMC9Q9Y3B6 208 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 PNPLA6Q8IY17 1366 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 KCNH1O95259 989 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 NPTXRO95502 500 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 KRT18P05783 430 aaKnown RBP7.89□□□□□ -1.15
SPEN-202ENST00000438066 NEFMP07197 916 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 IGFALSP35858 605 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 IRX6P78412 446 aaPredicted RBP7.89□□□□□ -1.15
SPEN-202ENST00000438066 CFAP100Q494V2 611 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 POMZP3Q6PJE2 187 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 SPATS2Q86XZ4 545 aaKnown RBP7.89□□□□□ -1.15
SPEN-202ENST00000438066 DMRTC2Q8IXT2 367 aaPredicted RBP7.89□□□□□ -1.15
SPEN-202ENST00000438066 NGEFQ8N5V2 710 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 GOLGA6L1Q8N7Z2 621 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 USP7Q93009 1102 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 HOOK2Q96ED9 719 aa7.89□□□□□ -1.15
SPEN-202ENST00000438066 SYNGAP1Q96PV0 1343 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 DLL1O00548 723 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 EIF3JO75822 258 aaKnown RBP7.88□□□□□ -1.15
SPEN-202ENST00000438066 EPXP11678 715 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 KCNJ6P48051 423 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 PIN1Q13526 163 aaPredicted RBP7.88□□□□□ -1.15
SPEN-202ENST00000438066 AUHQ13825 339 aaKnown RBP7.88□□□□□ -1.15
SPEN-202ENST00000438066 ANKRD39Q53RE8 183 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 NBPF12Q5TAG4 269 aaPredicted RBP7.88□□□□□ -1.15
SPEN-202ENST00000438066 SLCO4C1Q6ZQN7 724 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 C7orf61Q8IZ16 206 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 CNTD1Q8N815 330 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 PTPRN2Q92932 1015 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 CFAP53Q96M91 514 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 GP6Q9HCN6 339 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 CGGBP1Q9UFW8 167 aaPredicted RBP7.88□□□□□ -1.15
SPEN-202ENST00000438066 TRHDEQ9UKU6 1024 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 NOB1Q9ULX3 412 aaKnown RBP7.88□□□□□ -1.15
SPEN-202ENST00000438066 TRAF6Q9Y4K3 522 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 USP54Q70EL1 1684 aa7.88□□□□□ -1.15
SPEN-202ENST00000438066 NWD1Q149M9 1564 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 NEMP1O14524 444 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 APAF1O14727 1248 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 PLIN1O60240 522 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 CST3P01034 146 aaPredicted RBP7.87□□□□□ -1.15
SPEN-202ENST00000438066 ITGA4P13612 1032 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 ID4P47928 161 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 SKOR2Q2VWA4 1001 aaPredicted RBP7.87□□□□□ -1.15
SPEN-202ENST00000438066 ZBTB46Q86UZ6 589 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 CRACR2BQ8N4Y2 399 aaPredicted RBP7.87□□□□□ -1.15
SPEN-202ENST00000438066 KCT2Q8NC54 265 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 TTC8Q8TAM2 541 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 PI4K2BQ8TCG2 481 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 KCTD13Q8WZ19 329 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 RCC1LQ96I51 464 aaKnown RBP7.87□□□□□ -1.15
SPEN-202ENST00000438066 MAGEB10Q96LZ2 347 aaPredicted RBP7.87□□□□□ -1.15
SPEN-202ENST00000438066 CDH19Q9H159 772 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 ATXN3LQ9H3M9 355 aa7.87□□□□□ -1.15
SPEN-202ENST00000438066 CDK12Q9NYV4 1490 aaPredicted RBP7.87□□□□□ -1.15
SPEN-202ENST00000438066 RNGTTO60942 597 aaKnown RBP7.86□□□□□ -1.15
SPEN-202ENST00000438066 RGS20O76081 388 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 FLT3P36888 993 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 PPP2R5DQ14738 602 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 NTRK3Q16288 839 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 NOL9Q5SY16 702 aaKnown RBP7.86□□□□□ -1.15
SPEN-202ENST00000438066 GTF2IRD2BQ6EKJ0 949 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 PPP4R4Q6NUP7 873 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 GTF2IRD2Q86UP8 949 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 PASD1Q8IV76 773 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 MAP4K3Q8IVH8 894 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 TRMT2AQ8IZ69 625 aaKnown RBP7.86□□□□□ -1.15
SPEN-202ENST00000438066 ARHGEF39Q8N4T4 335 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 PPP1R13LQ8WUF5 828 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 ISL2Q96A47 359 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 RTFDC1Q9BY42 306 aaPredicted RBP7.86□□□□□ -1.15
SPEN-202ENST00000438066 PUS7LQ9H0K6 701 aaKnown RBP7.86□□□□□ -1.15
SPEN-202ENST00000438066 NOL6Q9H6R4 1146 aaKnown RBP7.86□□□□□ -1.15
SPEN-202ENST00000438066 IFT22Q9H7X7 185 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 SSU72Q9NP77 194 aaKnown RBP7.86□□□□□ -1.15
SPEN-202ENST00000438066 RCAN3Q9UKA8 241 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 USP6P35125 1406 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 SSH2Q76I76 1423 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 ANKARQ7Z5J8 1434 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 MARF1Q9Y4F3 1742 aaKnown RBP7.86□□□□□ -1.15
SPEN-202ENST00000438066 AATKQ6ZMQ8 1374 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 LRRC7Q96NW7 1537 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 TCRBV16S1A1N1A0A5B0 115 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 GABRDO14764 452 aa7.86□□□□□ -1.15
SPEN-202ENST00000438066 DEAF1O75398 565 aaPredicted RBP7.86□□□□□ -1.15
SPEN-202ENST00000438066 GFRA1P56159 465 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms