RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 TUBB4BP68371 445 aa18.62■□□□□ 0.57
TTC3-209ENST00000438055 CKAP4Q07065 602 aaKnown RBP18.62■□□□□ 0.57
TTC3-209ENST00000438055 DNAJC7Q99615 494 aa18.62■□□□□ 0.57
TTC3-209ENST00000438055 TACC1O75410 805 aa18.62■□□□□ 0.57
TTC3-209ENST00000438055 SAMD1Q6SPF0 538 aaPredicted RBP18.62■□□□□ 0.57
TTC3-209ENST00000438055 C16orf86Q6ZW13 317 aa18.62■□□□□ 0.57
TTC3-209ENST00000438055 GSPT2Q8IYD1 628 aaKnown RBP18.62■□□□□ 0.57
TTC3-209ENST00000438055 MYMKA6NI61 221 aa18.62■□□□□ 0.57
TTC3-209ENST00000438055 FGFR1OPO95684 399 aaKnown RBP18.62■□□□□ 0.57
TTC3-209ENST00000438055 ZNF507Q8TCN5 953 aa18.62■□□□□ 0.57
TTC3-209ENST00000438055 ANKS1AQ92625 1134 aa18.62■□□□□ 0.57
TTC3-209ENST00000438055 MAGEF1Q9HAY2 307 aa18.62■□□□□ 0.57
TTC3-209ENST00000438055 RBM5P52756 815 aaKnown RBP eCLIP18.61■□□□□ 0.578e-6■■□□□ 11.9
TTC3-209ENST00000438055 MAP9Q49MG5 647 aa18.61■□□□□ 0.57
TTC3-209ENST00000438055 KCTD1Q719H9 257 aa18.61■□□□□ 0.57
TTC3-209ENST00000438055 NDST4Q9H3R1 872 aa18.61■□□□□ 0.57
TTC3-209ENST00000438055 SLC37A4O43826 429 aa18.61■□□□□ 0.57
TTC3-209ENST00000438055 AKR1B1P15121 316 aa18.61■□□□□ 0.57
TTC3-209ENST00000438055 ATP2B4P23634 1241 aa18.61■□□□□ 0.57
TTC3-209ENST00000438055 CXCR5P32302 372 aa18.61■□□□□ 0.57
TTC3-209ENST00000438055 PRR5LQ6MZQ0 368 aa18.61■□□□□ 0.57
TTC3-209ENST00000438055 TMED8Q6PL24 325 aaPredicted RBP18.61■□□□□ 0.57
TTC3-209ENST00000438055 RBM17Q96I25 401 aaKnown RBP18.61■□□□□ 0.57
TTC3-209ENST00000438055 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
TTC3-209ENST00000438055 KANSL2Q9H9L4 492 aa18.61■□□□□ 0.57
TTC3-209ENST00000438055 M0R2N6 131 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 NKRFO15226 690 aaKnown RBP eCLIP18.6■□□□□ 0.576e-8■■■□□ 18.1
TTC3-209ENST00000438055 MEX3CQ5U5Q3 659 aaKnown RBP18.6■□□□□ 0.57
TTC3-209ENST00000438055 KIAA0895Q8NCT3 520 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.6■□□□□ 0.571e-6■□□□□ 8
TTC3-209ENST00000438055 USP21Q9UK80 565 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 RCCD1A6NED2 376 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 SERPINB2P05120 415 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 EIF4A3P38919 411 aaKnown RBP18.6■□□□□ 0.57
TTC3-209ENST00000438055 C2orf54Q08AI8 447 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 ZSCAN26Q16670 478 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 DDX12PQ92771 950 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 C7orf25Q9BPX7 421 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 PLEKHA4Q9H4M7 779 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 MLXIPQ9HAP2 919 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 MAGEA1P43355 309 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 TTBK2Q6IQ55 1244 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 RETREG2Q8NC44 543 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 MSANTD4Q8NCY6 345 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 SEMA6BQ9H3T3 888 aa18.6■□□□□ 0.57
TTC3-209ENST00000438055 ARAP2Q8WZ64 1704 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 GPR75-ASB3A0A0A6YYF3 556 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 MOCS3O95396 460 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 PDHBP11177 359 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 PPP1R2P41236 205 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 DOK7Q18PE1 504 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 CCDC155Q8N6L0 562 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 ALS2CR12Q96Q35 445 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 TMX4Q9H1E5 349 aaPredicted RBP18.59■□□□□ 0.57
TTC3-209ENST00000438055 L1RE1Q9UN81 338 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 BCORQ6W2J9 1755 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 VWA3BQ502W6 1294 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 IQCEQ6IPM2 695 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 NUDT12Q9BQG2 462 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 DDX25Q9UHL0 483 aaKnown RBP18.59■□□□□ 0.57
TTC3-209ENST00000438055 BUB1O43683 1085 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 GRB10Q13322 594 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 ZC3H12CQ9C0D7 883 aaKnown RBP18.59■□□□□ 0.57
TTC3-209ENST00000438055 USP40Q9NVE5 1235 aa18.59■□□□□ 0.57
TTC3-209ENST00000438055 TOM1O60784 492 aa18.58■□□□□ 0.57
TTC3-209ENST00000438055 TCP10Q12799 353 aa18.58■□□□□ 0.57
TTC3-209ENST00000438055 CCDC170Q8IYT3 715 aa18.58■□□□□ 0.57
TTC3-209ENST00000438055 MXD3Q9BW11 206 aa18.58■□□□□ 0.57
TTC3-209ENST00000438055 MYH8P13535 1937 aa18.58■□□□□ 0.57
TTC3-209ENST00000438055 NHSL1Q5SYE7 1610 aa18.58■□□□□ 0.56
TTC3-209ENST00000438055 PSMD14O00487 310 aa18.58■□□□□ 0.56
TTC3-209ENST00000438055 SLURP2P0DP57 97 aa18.58■□□□□ 0.56
TTC3-209ENST00000438055 TRAPPC11Q7Z392 1133 aa18.58■□□□□ 0.56
TTC3-209ENST00000438055 MMTAG2Q9BU76 263 aaKnown RBP18.58■□□□□ 0.56
TTC3-209ENST00000438055 CWC15Q9P013 229 aaKnown RBP18.58■□□□□ 0.56
TTC3-209ENST00000438055 PCDHA12Q9UN75 941 aa18.58■□□□□ 0.56
TTC3-209ENST00000438055 PLCH1Q4KWH8 1693 aa18.58■□□□□ 0.56
TTC3-209ENST00000438055 TUBBP07437 444 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 FECHP22830 423 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 KIF11P52732 1056 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 VAV2P52735 878 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 MRPL12P52815 198 aaKnown RBP18.57■□□□□ 0.56
TTC3-209ENST00000438055 HERC4Q5GLZ8 1057 aaPredicted RBP18.57■□□□□ 0.56
TTC3-209ENST00000438055 UNC13DQ70J99 1090 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 CCDC84Q86UT8 332 aaPredicted RBP18.57■□□□□ 0.56
TTC3-209ENST00000438055 GLIS3Q8NEA6 775 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 TBC1D22AQ8WUA7 517 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 ZNF219Q9P2Y4 722 aaPredicted RBP18.57■□□□□ 0.56
TTC3-209ENST00000438055 DAGLAQ9Y4D2 1042 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 LRRC53A6NM62 1247 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 FAM196BA6NMK8 535 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 ZBTB22O15209 634 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 MCM3P25205 808 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 MAN2A1Q16706 1144 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 MYOCDQ8IZQ8 938 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 MTMR4Q9NYA4 1195 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 RAB21Q9UL25 225 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 STRCQ7RTU9 1775 aa18.57■□□□□ 0.56
TTC3-209ENST00000438055 EIF3CLB5ME19 914 aaKnown RBP18.57■□□□□ 0.56
TTC3-209ENST00000438055 AMPD2Q01433 879 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms