RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 CCDC188H7C350 402 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 HP1BP3Q5SSJ5 553 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-209ENST00000437951 BSPRYQ5W0U4 402 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 PARD6BQ9BYG5 372 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 BUB1O43683 1085 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 GADD45BO75293 160 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-209ENST00000437951 PYGMP11217 842 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 TAC1P20366 129 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 ACAD11Q709F0 780 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 CNBD2Q96M20 576 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 ARHGEF10LQ9HCE6 1279 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 SPTLC3Q9NUV7 552 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 MAPK8IP1Q9UQF2 711 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 C1orf146Q5VVC0 180 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 LINS1Q8NG48 757 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.47□□□□□ -0.41
PTCH1-209ENST00000437951 ZNF274Q96GC6 653 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-209ENST00000437951 DACH2Q96NX9 599 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 DNAJC17Q9NVM6 304 aaKnown RBP12.47□□□□□ -0.41
PTCH1-209ENST00000437951 TRAF3IP3Q9Y228 551 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 MAML1Q92585 1016 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 TUBGCP3Q96CW5 907 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 CXorf56Q9H5V9 222 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 MKL2Q9ULH7 1088 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 KIAA0586Q9BVV6 1533 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 MRC2Q9UBG0 1479 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 A0A1W2PQ27 194 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 A0A1W2PQ64 194 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 A0A1W2PQD8 194 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 C16orf96A6NNT2 1141 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 SLC44A4Q53GD3 710 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 TRPV6Q9H1D0 765 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 SUN2Q9UH99 717 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 ZNF189O75820 626 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-209ENST00000437951 PDHA1P08559 390 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 NCF2P19878 526 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-209ENST00000437951 TBC1D1Q86TI0 1168 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-209ENST00000437951 BBS5Q8N3I7 341 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 CDC37L1Q7L3B6 337 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 SLC35F6Q8N357 371 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 TRIM45Q9H8W5 580 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-209ENST00000437951 ZBTB21Q9ULJ3 1066 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 ABCB4P21439 1286 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 SGO2Q562F6 1265 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 KIF17Q9P2E2 1029 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 L3MBTL1Q9Y468 752 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 TTLL3Q9Y4R7 772 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 FAM135BQ49AJ0 1406 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 BIVM-ERCC5R4GMW8 1640 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 GMNCA6NCL1 334 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 CD19P15391 556 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 TFAP4Q01664 338 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 BLOC1S6Q9UL45 172 aa12.46□□□□□ -0.41
PTCH1-209ENST00000437951 KLC1Q07866 573 aa12.46□□□□□ -0.42
PTCH1-209ENST00000437951 DAB2IPQ5VWQ8 1189 aa12.46□□□□□ -0.42
PTCH1-209ENST00000437951 PATL1Q86TB9 770 aaKnown RBP12.46□□□□□ -0.42
PTCH1-209ENST00000437951 ZNF212Q9UDV6 495 aa12.46□□□□□ -0.42
PTCH1-209ENST00000437951 ADAM21Q9UKJ8 722 aa12.46□□□□□ -0.42
PTCH1-209ENST00000437951 PFKFB1P16118 471 aa12.46□□□□□ -0.42
PTCH1-209ENST00000437951 BASP1P80723 227 aaKnown RBP12.46□□□□□ -0.42
PTCH1-209ENST00000437951 DHTKD1Q96HY7 919 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-209ENST00000437951 COG4Q9H9E3 785 aa12.46□□□□□ -0.42
PTCH1-209ENST00000437951 CHPF2Q9P2E5 772 aa12.46□□□□□ -0.42
PTCH1-209ENST00000437951 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 EHHADHQ08426 723 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 NLRC4Q9NPP4 1024 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 PKD2L2Q9NZM6 624 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 PNMA2Q9UL42 364 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 FOXP2O15409 715 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 SEC31AO94979 1220 aaKnown RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 TXKP42681 527 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 ACBD5Q5T8D3 534 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 SYBUQ9NX95 663 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 RGS12O14924 1447 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 PRR23D1E9PI22 279 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 NR1I2O75469 434 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 LDHBP07195 334 aaKnown RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 PRR23D2P0DMB1 279 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 SERPINB1P30740 379 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 COPB1P53618 953 aaKnown RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 PMS1P54277 932 aaKnown RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 GUCY1A3Q02108 690 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 THAP11Q96EK4 314 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 ZBTB3Q9H5J0 574 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 PPARGP37231 505 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 BZW1Q7L1Q6 419 aaKnown RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 BABAM1Q9NWV8 329 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 ABCA10Q8WWZ4 1543 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 SGSM2O43147 1006 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 TNNI1P19237 187 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 MRPS35P82673 323 aaKnown RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 DAB2P98082 770 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 MAPRE2Q15555 327 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 TCP11X2Q5H9J9 407 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 CHST3Q7LGC8 479 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 TTLL11Q8NHH1 800 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 BRIP1Q9BX63 1249 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 KLC2Q9H0B6 622 aa12.45□□□□□ -0.42
PTCH1-209ENST00000437951 MRPL47Q9HD33 250 aaKnown RBP12.45□□□□□ -0.42
PTCH1-209ENST00000437951 MYO1FO00160 1098 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms