RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 UNC80Q8N2C7 3258 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 GBF1Q92538 1859 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 CDH23Q9H251 3354 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 CCDC69A6NI79 296 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 SLC16A2P36021 539 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 BEX3Q00994 111 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 SCRN1Q12765 414 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 TMEM63BQ5T3F8 832 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 IFIT1BQ5T764 474 aaKnown RBP12.67□□□□□ -0.38
HMGCL-204ENST00000436439 CCDC83Q8IWF9 413 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 SPRYD3Q8NCJ5 442 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 GLT1D1Q96MS3 346 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 ZKSCAN3Q9BRR0 538 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 CYP39A1Q9NYL5 469 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 TBX21Q9UL17 535 aa12.67□□□□□ -0.38
HMGCL-204ENST00000436439 ELP1O95163 1332 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 DCDC2CA8MYV0 355 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 DHX16O60231 1041 aaKnown RBP12.66□□□□□ -0.38
HMGCL-204ENST00000436439 PDIA4P13667 645 aaKnown RBP12.66□□□□□ -0.38
HMGCL-204ENST00000436439 DEKP35659 375 aaKnown RBP12.66□□□□□ -0.38
HMGCL-204ENST00000436439 NKX3-2P78367 333 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 SMAD3P84022 425 aaKnown RBP12.66□□□□□ -0.38
HMGCL-204ENST00000436439 TNFAIP2Q03169 654 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 FPGSQ05932 587 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 CCDC96Q2M329 555 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 TKFCQ3LXA3 575 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 GNASQ5JWF2 1037 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 SYNE3Q6ZMZ3 975 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 NFXL1Q6ZNB6 911 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 NECAB1Q8N987 351 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 PCSK9Q8NBP7 692 aaKnown RBP12.66□□□□□ -0.38
HMGCL-204ENST00000436439 RNPC3Q96LT9 517 aaKnown RBP12.66□□□□□ -0.38
HMGCL-204ENST00000436439 MAP3K14Q99558 947 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 CDX2Q99626 313 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-204ENST00000436439 TMEM47Q9BQJ4 181 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 RANBP17Q9H2T7 1088 aaKnown RBP12.66□□□□□ -0.38
HMGCL-204ENST00000436439 SEMA6BQ9H3T3 888 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 SENP2Q9HC62 589 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 PDGFCQ9NRA1 345 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 GNEQ9Y223 722 aaKnown RBP12.66□□□□□ -0.38
HMGCL-204ENST00000436439 SLC12A7Q9Y666 1083 aa12.66□□□□□ -0.38
HMGCL-204ENST00000436439 FRMPD2Q68DX3 1309 aaPredicted RBP12.65□□□□□ -0.38
HMGCL-204ENST00000436439 GOLGA8BA8MQT2 603 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 ARVCFO00192 962 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 ZBTB43O43298 467 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 DDAH1O94760 285 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 TIMP1P01033 207 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 CALM1P0DP23 149 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 CALM2P0DP24 149 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 CALM3P0DP25 149 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 STK3Q13188 491 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 TAPT1Q6NXT6 567 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 BTNL9Q6UXG8 535 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 NSMFQ6X4W1 530 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 EEPD1Q7L9B9 569 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 FBXO16Q8IX29 292 aaPredicted RBP12.65□□□□□ -0.38
HMGCL-204ENST00000436439 FAM126BQ8IXS8 530 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 ZNF654Q8IZM8 581 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 SMARCC2Q8TAQ2 1214 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 DCAF4Q8WV16 495 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 VTI1AQ96AJ9 217 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 SPC25Q9HBM1 224 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 CCPG1Q9ULG6 757 aa12.65□□□□□ -0.38
HMGCL-204ENST00000436439 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
HMGCL-204ENST00000436439 ASB14A6NK59 587 aa12.64□□□□□ -0.39
HMGCL-204ENST00000436439 NFIBO00712 420 aa12.64□□□□□ -0.39
HMGCL-204ENST00000436439 ICAM1P05362 532 aa12.64□□□□□ -0.39
HMGCL-204ENST00000436439 SMPD1P17405 629 aa12.64□□□□□ -0.39
HMGCL-204ENST00000436439 METAP2P50579 478 aaKnown RBP eCLIP12.64□□□□□ -0.39
HMGCL-204ENST00000436439 HMGN5P82970 282 aaKnown RBP12.64□□□□□ -0.39
HMGCL-204ENST00000436439 C16orf59Q7L2K0 433 aa12.64□□□□□ -0.39
HMGCL-204ENST00000436439 TLK2Q86UE8 772 aa12.64□□□□□ -0.39
HMGCL-204ENST00000436439 MYLIPQ8WY64 445 aa12.64□□□□□ -0.39
HMGCL-204ENST00000436439 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.64□□□□□ -0.39
HMGCL-204ENST00000436439 GPCPD1Q9NPB8 672 aa12.64□□□□□ -0.39
HMGCL-204ENST00000436439 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
HMGCL-204ENST00000436439 MROH7Q68CQ1 1323 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 CCDC196A0A1B0GTZ2 297 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 CTDNEP1O95476 244 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 CD4P01730 458 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 PDHBP11177 359 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 TOP1P11387 765 aaKnown RBP12.63□□□□□ -0.39
HMGCL-204ENST00000436439 TROAPQ12815 778 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 BAATQ14032 418 aaPredicted RBP12.63□□□□□ -0.39
HMGCL-204ENST00000436439 SYDE2Q5VT97 1194 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 MFSD5Q6N075 450 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 CXCL17Q6UXB2 119 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 SLC43A3Q8NBI5 491 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 RGS22Q8NE09 1264 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 NSUN7Q8NE18 718 aaKnown RBP12.63□□□□□ -0.39
HMGCL-204ENST00000436439 MORC4Q8TE76 937 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 FAM217BQ9NTX9 383 aaPredicted RBP12.63□□□□□ -0.39
HMGCL-204ENST00000436439 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 GRIN2DO15399 1336 aa12.63□□□□□ -0.39
HMGCL-204ENST00000436439 GOLGA8AA7E2F4 631 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 DYNC1LI2O43237 492 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-204ENST00000436439 CDKL5O76039 1030 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms