RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 MTMR9Q96QG7 549 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 DAGLAQ9Y4D2 1042 aa11.62□□□□□ -0.55
CLSTN1-203ENST00000435891 MAP2K7O14733 419 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 CCDC122Q5T0U0 273 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 KRT26Q7Z3Y9 468 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 NCAPGQ9BPX3 1015 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 RIOX1Q9H6W3 641 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 GPCPD1Q9NPB8 672 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 DDX4Q9NQI0 724 aaKnown RBP11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 USP21Q9UK80 565 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 RAB21Q9UL25 225 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 GYS1P13807 737 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 MTIF2P46199 727 aaKnown RBP11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 GTF2IP78347 998 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 MEA1Q16626 185 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 YY1AP1Q9H869 796 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 ZNF287Q9HBT7 754 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 CTAGE15A4D2H0 777 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 ZNF263O14978 683 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 RIMBP2O15034 1052 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 PPP1R11O60927 126 aaPredicted RBP11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 SERPINB2P05120 415 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 CTAGE8P0CG41 777 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 NOVP48745 357 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 BRD3Q15059 726 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 ECM1Q16610 540 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 UBE2SQ16763 222 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 TTBK2Q6IQ55 1244 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 CTAGE6Q86UF2 777 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 CTAGE4Q8IX94 777 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 FNBP4Q8N3X1 1017 aaPredicted RBP11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 NOC4LQ9BVI4 516 aaKnown RBP11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 CUEDC2Q9H467 287 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 NHEJ1Q9H9Q4 299 aaPredicted RBP11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 MTMR4Q9NYA4 1195 aa11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 RRP15Q9Y3B9 282 aaKnown RBP11.61□□□□□ -0.55
CLSTN1-203ENST00000435891 GAKO14976 1311 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 N4BP1O75113 896 aaKnown RBP11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 TRAPPC11Q7Z392 1133 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 PCMTD1Q96MG8 357 aaPredicted RBP11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 MYO1AQ9UBC5 1043 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 LRWD1Q9UFC0 647 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 NHSQ6T4R5 1651 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 ATP2B4P23634 1241 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 NT5C2P49902 561 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 ATP2B2Q01814 1243 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 CALCRLQ16602 461 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 DPP8Q6V1X1 898 aaPredicted RBP11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 MMS19Q96T76 1030 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 PDE11AQ9HCR9 933 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 SLC16A2P36021 539 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 LRRC41Q15345 812 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 WHAMMP3Q1A5X7 153 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 CERKQ8TCT0 537 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 FAM163AQ96GL9 167 aaPredicted RBP11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 CAPZA3Q96KX2 299 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 HAUS4Q9H6D7 363 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 L1RE1Q9UN81 338 aa11.6□□□□□ -0.55
CLSTN1-203ENST00000435891 PSMD14O00487 310 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 ZNF185O15231 689 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 GABPAQ06546 454 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 CERS5Q8N5B7 392 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 CCDC155Q8N6L0 562 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 SMCR8Q8TEV9 937 aaPredicted RBP11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 NOP2P46087 812 aaKnown RBP11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 DDR1Q08345 913 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 CENPPQ6IPU0 288 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 ZSCAN29Q8IWY8 852 aaPredicted RBP11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 ZNF622Q969S3 477 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 CALML4Q96GE6 196 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 MAGEF1Q9HAY2 307 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 BICDL2A1A5D9 508 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 MACROD2A1Z1Q3 448 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 TNNI2P48788 182 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 SHROOM1Q2M3G4 852 aaPredicted RBP11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 TSR1Q2NL82 804 aaKnown RBP11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 SV2BQ7L1I2 683 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 KIAA1328Q86T90 577 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 HNRNPLLQ8WVV9 542 aaKnown RBP11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 JAKMIP2Q96AA8 810 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 JMJD4Q9H9V9 463 aa11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 FAM207AQ9NSI2 230 aaPredicted RBP11.59□□□□□ -0.55
CLSTN1-203ENST00000435891 LY75O60449 1722 aa11.58□□□□□ -0.55
CLSTN1-203ENST00000435891 IDEP14735 1019 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 PLCG2P16885 1265 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 ZBED6P86452 979 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 NOC3LQ8WTT2 800 aaKnown RBP11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 LARP4BQ92615 738 aaKnown RBP11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 FAM212AQ96EL1 285 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 ESYT2A0FGR8 921 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 PDE2AO00408 941 aaPredicted RBP11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 SCNN1DP51172 638 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 CNNM4Q6P4Q7 775 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 ERGIC2Q96RQ1 377 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 HINFPQ9BQA5 517 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 TOM1O60784 492 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 ADCY7P51828 1080 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 TUBB2AQ13885 445 aa11.58□□□□□ -0.56
CLSTN1-203ENST00000435891 ADGRF4Q8IZF3 695 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms