RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 A0A1B0GVG6 124 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 H7C1D1 291 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 PPIP5K2O43314 1243 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 FMNL1O95466 1100 aaPredicted RBP8.21□□□□□ -1.1
CPSF6-202ENST00000435070 DNM2P50570 870 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 TRAF1Q13077 416 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 SH3RF1Q7Z6J0 888 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 LBHD1Q9BQE6 289 aaPredicted RBP8.21□□□□□ -1.1
CPSF6-202ENST00000435070 DPH5Q9H2P9 285 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 EBF2Q9HAK2 575 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 USP31Q70CQ4 1352 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 LINGO3P0C6S8 592 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 RPUSD2Q8IZ73 545 aaKnown RBP8.21□□□□□ -1.1
CPSF6-202ENST00000435070 FBXL16Q8N461 479 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 ANKS4BQ8N8V4 417 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 SLC17A8Q8NDX2 589 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 NLRC4Q9NPP4 1024 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 PAPOLBQ9NRJ5 636 aaKnown RBP8.21□□□□□ -1.1
CPSF6-202ENST00000435070 ABCF3Q9NUQ8 709 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 AGAP1Q9UPQ3 857 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 EPHB6O15197 1021 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 ALDH5A1P51649 535 aaPredicted RBP8.21□□□□□ -1.1
CPSF6-202ENST00000435070 MXRA7P84157 204 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 FOXP1Q9H334 677 aaPredicted RBP8.21□□□□□ -1.1
CPSF6-202ENST00000435070 GOPCQ9HD26 462 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 CACNA1FO60840 1977 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 ROBO2Q9HCK4 1378 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 OVOS2A0A0G2JMS6 1433 aa8.21□□□□□ -1.1
CPSF6-202ENST00000435070 RASSF10A6NK89 507 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 DRD4P21917 467 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 SLC1A4P43007 532 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 DNAAF5Q86Y56 855 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 LPIN2Q92539 896 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 TSGA10Q9BZW7 698 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 GGA2Q9UJY4 613 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ANKRD33BA6NCL7 494 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 PCK1P35558 622 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ERVK-9P63128 1117 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 UAP1Q16222 522 aaPredicted RBP8.2□□□□□ -1.1
CPSF6-202ENST00000435070 CHMP6Q96FZ7 201 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ACSBG1Q96GR2 724 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 GDF3Q9NR23 364 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 PALMO75781 387 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 DNAJC8O75937 253 aaPredicted RBP8.2□□□□□ -1.1
CPSF6-202ENST00000435070 SHBGP04278 402 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 IFNAR1P17181 557 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ABL2P42684 1182 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 POLE2P56282 527 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ZC3H12AQ5D1E8 599 aaKnown RBP8.2□□□□□ -1.1
CPSF6-202ENST00000435070 AKAP4Q5JQC9 854 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ZNF658Q5TYW1 1059 aaPredicted RBP8.2□□□□□ -1.1
CPSF6-202ENST00000435070 KLHDC7AQ5VTJ3 777 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 TRIM33Q9UPN9 1127 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 PP2D1A8MPX8 630 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 UBOX5O94941 541 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ARID4AP29374 1257 aaPredicted RBP8.2□□□□□ -1.1
CPSF6-202ENST00000435070 PPM1FP49593 454 aaPredicted RBP8.2□□□□□ -1.1
CPSF6-202ENST00000435070 PAPOLAP51003 745 aaKnown RBP8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ZC3H6P61129 1189 aaKnown RBP8.2□□□□□ -1.1
CPSF6-202ENST00000435070 RUFY4Q6ZNE9 571 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 MGARPQ8TDB4 240 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 HPS3Q969F9 1004 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 KLHL29Q96CT2 875 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 NOX5Q96PH1 765 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.2□□□□□ -1.13e-8■□□□□ 9.6
CPSF6-202ENST00000435070 IGF2BP3O00425 579 aaKnown RBP eCLIP8.2□□□□□ -1.1
CPSF6-202ENST00000435070 MAP3K13O43283 966 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 STAT6P42226 847 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ICA1Q05084 483 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 MEA1Q16626 185 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ANKRD20A2Q5SQ80 823 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ANKRD20A1Q5TYW2 823 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ANKRD20A3Q5VUR7 823 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 KSR1Q8IVT5 923 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 LRRC34Q8IZ02 419 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 ZNF507Q8TCN5 953 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 WHAMMQ8TF30 809 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 CDK5RAP3Q96JB5 506 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 MTFR1LQ9H019 292 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 NEUROG2Q9H2A3 272 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 PICK1Q9NRD5 415 aa8.2□□□□□ -1.1
CPSF6-202ENST00000435070 DPPA5A6NC42 116 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 IL15P40933 162 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 DDX47Q9H0S4 455 aaKnown RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 V9GY48 417 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 MST1RQ04912 1400 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 SPDYE5A6NIY4 337 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 PSMA7O14818 248 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 GTPBP6O43824 516 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 CEP104O60308 925 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 LACTB2Q53H82 288 aaPredicted RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 NBPF10Q6P3W6 841 aaKnown RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 CNOT6LQ96LI5 555 aaKnown RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 PURBQ96QR8 312 aaKnown RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 XPO6Q96QU8 1125 aaKnown RBP8.19□□□□□ -1.1
CPSF6-202ENST00000435070 ZFATQ9P243 1243 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 ATP8A1Q9Y2Q0 1164 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 EYA2O00167 538 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 KCNK3O14649 394 aa8.19□□□□□ -1.1
CPSF6-202ENST00000435070 DAPK3O43293 454 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms