RNA–Protein interactions for RNA: ENST00000431099.3

CBWD1-208, Transcript of COBW domain containing 1, human

TSL 5

Gene CBWD1, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-208	ENST00000431099	SMG9	Q9H0W8	520 aa	Known RBP	7.93	□□□□□ -1.14
CBWD1-208	ENST00000431099	RBSN	Q9H1K0	784 aa		7.93	□□□□□ -1.14
CBWD1-208	ENST00000431099	TDRD3	Q9H7E2	651 aa	Known RBP	7.93	□□□□□ -1.14
CBWD1-208	ENST00000431099	NPHS2	Q9NP85	383 aa		7.93	□□□□□ -1.14
CBWD1-208	ENST00000431099	GPR108	Q9NPR9	543 aa		7.93	□□□□□ -1.14
CBWD1-208	ENST00000431099	LATS2	Q9NRM7	1088 aa		7.93	□□□□□ -1.14
CBWD1-208	ENST00000431099	CSAD	Q9Y600	493 aa		7.93	□□□□□ -1.14
CBWD1-208	ENST00000431099	PTPRF	P10586	1907 aa		7.93	□□□□□ -1.14
CBWD1-208	ENST00000431099		M0R082	166 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	WDHD1	O75717	1129 aa	Predicted RBP	7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	GDF11	O95390	407 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	GTF2A2	P52657	109 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	ARHGEF6	Q15052	776 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	C8orf86	Q6ZUL3	223 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	ZNF417	Q8TAU3	575 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	FAM151A	Q8WW52	585 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	ZNF587	Q96SQ5	575 aa	Predicted RBP	7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	SIL1	Q9H173	461 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	RASSF4	Q9H2L5	321 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	CHMP4B	Q9H444	224 aa	Known RBP	7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	JPH1	Q9HDC5	661 aa	Predicted RBP	7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	DZANK1	Q9NVP4	752 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	SCAF8	Q9UPN6	1271 aa	Known RBP	7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	JAG2	Q9Y219	1238 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	RBBP6	Q7Z6E9	1792 aa	Known RBP	7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	FOCAD	Q5VW36	1801 aa		7.92	□□□□□ -1.14
CBWD1-208	ENST00000431099	FKTN	O75072	461 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	RGS9	O75916	674 aa	Predicted RBP	7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	IRS1	P35568	1242 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	ATP2B2	Q01814	1243 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	G3BP1	Q13283	466 aa	Known RBP eCLIP	7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	ERO1B	Q86YB8	467 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	FTSJ3	Q8IY81	847 aa	Known RBP	7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	EPS8L3	Q8TE67	593 aa	Known RBP	7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	TTC9	Q92623	222 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	OSMR	Q99650	979 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	ZKSCAN3	Q9BRR0	538 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	IDI2	Q9BXS1	227 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	PBX4	Q9BYU1	374 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	TMEM39B	Q9GZU3	492 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	PRDM6	Q9NQX0	595 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	GAK	O14976	1311 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	CDK5RAP2	Q96SN8	1893 aa		7.91	□□□□□ -1.14
CBWD1-208	ENST00000431099	MYO5A	Q9Y4I1	1855 aa	Known RBP	7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	COL2A1	P02458	1487 aa	Predicted RBP	7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099		A0A1B0GUL7	405 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099		A0A1W2PP55	124 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	TCP10L2	B9ZVM9	353 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	LILRB5	O75023	590 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	ENTPD3	O75355	529 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	BCAR3	O75815	825 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	LDHC	P07864	332 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	UQCRFS1P1	P0C7P4	283 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	PHKA1	P46020	1223 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	AFF1	P51825	1210 aa	Known RBP	7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	SNRPN	P63162	240 aa	Known RBP	7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	GSTO1	P78417	241 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	PPAT	Q06203	517 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	RASGRF1	Q13972	1273 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	GRIK5	Q16478	980 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	ALG1L	Q6GMV1	187 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	FBXO46	Q6PJ61	603 aa	Predicted RBP	7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	CERS3	Q8IU89	383 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	RGS22	Q8NE09	1264 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	SSH3	Q8TE77	659 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	FBF1	Q8TES7	1133 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	FRAT1	Q92837	279 aa	Predicted RBP	7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	OPTN	Q96CV9	577 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	ERO1A	Q96HE7	468 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	ZNF512B	Q96KM6	892 aa	Predicted RBP	7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	HHIP	Q96QV1	700 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	ZNF341	Q9BYN7	854 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	ZNF112	Q9UJU3	913 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	NOP58	Q9Y2X3	529 aa	Known RBP	7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	DAGLA	Q9Y4D2	1042 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	PCDHAC2	Q9Y5I4	1007 aa		7.9	□□□□□ -1.14
CBWD1-208	ENST00000431099	DOCK3	Q8IZD9	2030 aa		7.9	□□□□□ -1.15
CBWD1-208	ENST00000431099	MAST2	Q6P0Q8	1798 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	AOX1	Q06278	1338 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	CCDC85C	A6NKD9	419 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	SMNDC1	O75940	238 aa	Known RBP eCLIP	7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	TBC1D8	O95759	1140 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	CETP	P11597	493 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	PRDX5	P30044	214 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	TIMM10	P62072	90 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	ATP8B2	P98198	1209 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	PPIL2	Q13356	520 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	SNAPC2	Q13487	334 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	PRKG1	Q13976	671 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	COL9A3	Q14050	684 aa	Predicted RBP	7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	VGLL4	Q14135	290 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	NOL9	Q5SY16	702 aa	Known RBP	7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	KIAA0319	Q5VV43	1072 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	CEP135	Q66GS9	1140 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	CDC42EP5	Q6NZY7	148 aa		7.89	□□□□□ -1.15
CBWD1-208	ENST00000431099	PI16	Q6UXB8	463 aa		7.89	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms